No. |
Link to 3pfdb+ |
Pfam Description |
1 |
PF00561
|
alpha/beta hydrolase fold |
2 |
PF07859
|
alpha/beta hydrolase fold |
3 |
PF08252
|
arg-2/CPA1 leader peptide |
4 |
PF07388
|
Alpha-2,8-polysialyltransferase (POLYST) |
5 |
PF07966
|
A1 Propeptide |
6 |
PF08792
|
A2L zinc ribbon domain |
7 |
PF00207
|
Alpha-2-macroglobulin family |
8 |
PF07678
|
A-macroglobulin complement component |
9 |
PF07703
|
Alpha-2-macroglobulin family N-terminal region |
10 |
PF07677
|
A-macroglobulin receptor |
11 |
PF00004
|
ATPase family associated with various cellular activities (AAA) |
12 |
PF12846
|
AAA-like domain |
13 |
PF13086
|
AAA domain |
14 |
PF13087
|
AAA domain |
15 |
PF13166
|
AAA domain |
16 |
PF13173
|
AAA domain |
17 |
PF13175
|
AAA ATPase domain |
18 |
PF13191
|
AAA ATPase domain |
19 |
PF13207
|
AAA domain |
20 |
PF13238
|
AAA domain |
21 |
PF07724
|
AAA domain (Cdc48 subfamily) |
22 |
PF13304
|
AAA domain |
23 |
PF13401
|
AAA domain |
24 |
PF13476
|
AAA domain |
25 |
PF13479
|
AAA domain |
26 |
PF13481
|
AAA domain |
27 |
PF13500
|
AAA domain |
28 |
PF13514
|
AAA domain |
29 |
PF13521
|
AAA domain |
30 |
PF07726
|
ATPase family associated with various cellular activities (AAA) |
31 |
PF13604
|
AAA domain |
32 |
PF13614
|
AAA domain |
33 |
PF13654
|
AAA domain |
34 |
PF13671
|
AAA domain |
35 |
PF07728
|
AAA domain (dynein-related subfamily) |
36 |
PF12781
|
ATP-binding dynein motor region D5 |
37 |
PF03306
|
Alpha-acetolactate decarboxylase |
38 |
PF05282
|
AAR2 protein |
39 |
PF08142
|
AARP2CN (NUC121) domain |
40 |
PF03417
|
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase |
41 |
PF07247
|
Alcohol acetyltransferase |
42 |
PF13339
|
Apoptosis antagonizing transcription factor |
43 |
PF00696
|
Amino acid kinase family |
44 |
PF00324
|
Amino acid permease |
45 |
PF13520
|
Amino acid permease |
46 |
PF08403
|
Amino acid permease N-terminal |
47 |
PF06684
|
Amino acid synthesis |
48 |
PF12430
|
Abscisic acid G-protein coupled receptor |
49 |
PF02496
|
ABA/WDS induced protein |
50 |
PF14156
|
Antirepressor AbbA |
51 |
PF00950
|
ABC 3 transport family |
52 |
PF03109
|
ABC1 family |
53 |
PF01061
|
ABC-2 type transporter |
54 |
PF12679
|
ABC-2 family transporter protein |
55 |
PF12698
|
ABC-2 family transporter protein |
56 |
PF12730
|
ABC-2 family transporter protein |
57 |
PF13346
|
ABC-2 family transporter protein |
58 |
PF06182
|
ABC-2 family transporter protein |
59 |
PF09819
|
ABC-type cobalt transport system, permease component |
60 |
PF00664
|
ABC transporter transmembrane region |
61 |
PF06472
|
ABC transporter transmembrane region 2 |
62 |
PF13748
|
ABC transporter transmembrane region |
63 |
PF04392
|
ABC transporter substrate binding protein |
64 |
PF00005
|
ABC transporter |
65 |
PF09821
|
ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit |
66 |
PF09822
|
ABC-type uncharacterized transport system |
67 |
PF12848
|
ABC transporter |
68 |
PF05270
|
Alpha-L-arabinofuranosidase B (ABFB) |
69 |
PF03806
|
AbgT putative transporter family |
70 |
PF12695
|
Alpha/beta hydrolase family |
71 |
PF12697
|
Alpha/beta hydrolase family |
72 |
PF12715
|
Abhydrolase family |
73 |
PF06259
|
Alpha/beta hydrolase |
74 |
PF07751
|
Abi-like protein |
75 |
PF14355
|
Abortive infection C-terminus |
76 |
PF07815
|
Abl-interactor HHR |
77 |
PF03992
|
Antibiotic biosynthesis monooxygenase |
78 |
PF09441
|
ARS binding protein 2 |
79 |
PF14250
|
AbrB-like transcriptional regulator |
80 |
PF13000
|
Acetyl-coenzyme A transporter 1 |
81 |
PF00887
|
Acyl CoA binding protein |
82 |
PF03255
|
Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit |
83 |
PF08326
|
Acetyl-CoA carboxylase, central region |
84 |
PF13822
|
Acyl-CoA carboxylase epsilon subunit |
85 |
PF00871
|
Acetokinase family |
86 |
PF08882
|
Acetone carboxylase gamma subunit |
87 |
PF02550
|
Acetyl-CoA hydrolase/transferase N-terminal domain |
88 |
PF13336
|
Acetyl-CoA hydrolase/transferase C-terminal domain |
89 |
PF00583
|
Acetyltransferase (GNAT) family |
90 |
PF13673
|
Acetyltransferase (GNAT) domain |
91 |
PF13302
|
Acetyltransferase (GNAT) domain |
92 |
PF13420
|
Acetyltransferase (GNAT) domain |
93 |
PF13444
|
Acetyltransferase (GNAT) domain |
94 |
PF13480
|
Acetyltransferase (GNAT) domain |
95 |
PF13508
|
Acetyltransferase (GNAT) domain |
96 |
PF13523
|
Acetyltransferase (GNAT) domain |
97 |
PF13527
|
Acetyltransferase (GNAT) domain |
98 |
PF08674
|
Acetylcholinesterase tetramerisation domain |
99 |
PF12689
|
Acid Phosphatase |
100 |
PF00330
|
Aconitase family (aconitate hydratase) |
101 |
PF06434
|
Aconitate hydratase 2 N-terminus |
102 |
PF11791
|
Aconitate B N-terminal domain |
103 |
PF00694
|
Aconitase C-terminal domain |
104 |
PF01756
|
Acyl-CoA oxidase |
105 |
PF00873
|
AcrB/AcrD/AcrF family |
106 |
PF01842
|
ACT domain |
107 |
PF09192
|
Actin-fragmin kinase, catalytic |
108 |
PF05058
|
ActA Protein |
109 |
PF00022
|
Actin |
110 |
PF01064
|
Activin types I and II receptor domain |
111 |
PF10000
|
ACT domain |
112 |
PF13291
|
ACT domain |
113 |
PF13710
|
ACT domain |
114 |
PF13740
|
ACT domain |
115 |
PF01643
|
Acyl-ACP thioesterase |
116 |
PF00441
|
Acyl-CoA dehydrogenase, C-terminal domain |
117 |
PF08028
|
Acyl-CoA dehydrogenase, C-terminal domain |
118 |
PF12806
|
Acetyl-CoA dehydrogenase C-terminal like |
119 |
PF02770
|
Acyl-CoA dehydrogenase, middle domain |
120 |
PF02771
|
Acyl-CoA dehydrogenase, N-terminal domain |
121 |
PF12590
|
Acyl-ATP thioesterase |
122 |
PF12186
|
Acyl-CoA dehydrogenase C terminal |
123 |
PF12418
|
Acyl-CoA dehydrogenase N terminal |
124 |
PF00708
|
Acylphosphatase |
125 |
PF01553
|
Acyltransferase |
126 |
PF02551
|
Acyl-CoA thioesterase |
127 |
PF00698
|
Acyl transferase domain |
128 |
PF02273
|
Acyl transferase |
129 |
PF01757
|
Acyltransferase family |
130 |
PF09793
|
Anticodon-binding domain |
131 |
PF08516
|
ADAM cysteine-rich |
132 |
PF05986
|
ADAM-TS Spacer 1 |
133 |
PF10199
|
Alpha and gamma adaptin binding protein p34 |
134 |
PF01602
|
Adaptin N terminal region |
135 |
PF00928
|
Adaptor complexes medium subunit family |
136 |
PF06314
|
Acetoacetate decarboxylase (ADC) |
137 |
PF13382
|
Adenine deaminase C-terminal domain |
138 |
PF04008
|
Adenosine specific kinase |
139 |
PF03052
|
Adenoviral protein L1 52/55-kDa |
140 |
PF01691
|
Adenovirus E1B 19K protein / small t-antigen |
141 |
PF01696
|
Adenovirus EB1 55K protein / large t-antigen |
142 |
PF04623
|
Adenovirus E1B protein N-terminus |
143 |
PF06040
|
Adenovirus E3 protein |
144 |
PF05248
|
Adenovirus E3A |
145 |
PF03376
|
Adenovirus E3B protein |
146 |
PF03307
|
Adenovirus 15.3kD protein in E3 region |
147 |
PF02440
|
Adenovirus E3 region protein CR1 |
148 |
PF02439
|
Adenovirus E3 region protein CR2 |
149 |
PF04528
|
Adenovirus early E4 34 kDa protein conserved region |
150 |
PF04881
|
Adenovirus GP19K |
151 |
PF02456
|
Adenovirus IVa2 protein |
152 |
PF00541
|
Adenoviral fibre protein (knob domain) |
153 |
PF01686
|
Adenovirus penton base protein |
154 |
PF03955
|
Adenovirus hexon-associated protein (IX) |
155 |
PF03910
|
Adenovirus minor core protein PV |
156 |
PF01310
|
Adenovirus hexon associated protein, protein VIII |
157 |
PF05829
|
Adenovirus late L2 mu core protein (Protein X) |
158 |
PF00608
|
Adenoviral fibre protein (repeat/shaft region) |
159 |
PF02459
|
Adenoviral DNA terminal protein |
160 |
PF03228
|
Adenoviral core protein VII |
161 |
PF01295
|
Adenylate cyclase, class-I |
162 |
PF00709
|
Adenylosuccinate synthetase |
163 |
PF12633
|
Adenylate cyclase NT domain |
164 |
PF09085
|
Adhesion molecule, immunoglobulin-like |
165 |
PF08240
|
Alcohol dehydrogenase GroES-like domain |
166 |
PF13823
|
Alcohol dehydrogenase GroES-associated |
167 |
PF11559
|
Afadin- and alpha -actinin-Binding |
168 |
PF06377
|
Adipokinetic hormone |
169 |
PF00406
|
Adenylate kinase |
170 |
PF05191
|
Adenylate kinase, active site lid |
171 |
PF03496
|
ADP-ribosyltransferase exoenzyme |
172 |
PF04587
|
ADP-specific Phosphofructokinase/Glucokinase conserved region |
173 |
PF03747
|
ADP-ribosylglycohydrolase |
174 |
PF10397
|
Adenylosuccinate lyase C-terminus |
175 |
PF08509
|
Adenylate cyclase G-alpha binding domain |
176 |
PF06355
|
Aegerolysin |
177 |
PF01117
|
Aerolysin toxin |
178 |
PF05110
|
AF-4 proto-oncoprotein |
179 |
PF03969
|
AFG1-like ATPase |
180 |
PF08493
|
Aflatoxin regulatory protein |
181 |
PF01314
|
Aldehyde ferredoxin oxidoreductase, domains 2 & 3 |
182 |
PF02730
|
Aldehyde ferredoxin oxidoreductase, N-terminal domain |
183 |
PF03756
|
A-factor biosynthesis hotdog domain |
184 |
PF11786
|
Aft1 HRA domain |
185 |
PF11787
|
Aft1 HRR domain |
186 |
PF11785
|
Aft1 osmotic stress response (OSM) domain |
187 |
PF12249
|
Arabinofuranosyltransferase A C terminal |
188 |
PF12250
|
Arabinofuranosyltransferase N terminal |
189 |
PF05641
|
Agenet domain |
190 |
PF07468
|
Agglutinin |
191 |
PF05039
|
Agouti protein |
192 |
PF10427
|
Argonaute hook |
193 |
PF04647
|
Accessory gene regulator B |
194 |
PF04730
|
Agrobacterium VirD5 protein |
195 |
PF06396
|
Angiotensin II, type I receptor-associated protein (AGTRAP) |
196 |
PF09229
|
Activator of Hsp90 ATPase, N-terminal |
197 |
PF14412
|
A nuclease family of the HNH/ENDO VII superfamily with conserved AHH |
198 |
PF00578
|
AhpC/TSA family |
199 |
PF13911
|
AhpC/TSA antioxidant enzyme |
200 |
PF02682
|
Allophanate hydrolase subunit 1 |
201 |
PF02626
|
Allophanate hydrolase subunit 2 |
202 |
PF08327
|
Activator of Hsp90 ATPase homolog 1-like protein |
203 |
PF09236
|
Alpha-haemoglobin stabilising protein |
204 |
PF01808
|
AICARFT/IMPCHase bienzyme |
205 |
PF04548
|
AIG1 family |
206 |
PF06094
|
AIG2-like family |
207 |
PF13772
|
AIG2-like family |
208 |
PF03915
|
Actin interacting protein 3 |
209 |
PF10592
|
AIPR protein |
210 |
PF00731
|
AIR carboxylase |
211 |
PF00586
|
AIR synthase related protein, N-terminal domain |
212 |
PF02769
|
AIR synthase related protein, C-terminal domain |
213 |
PF10469
|
AKAP7 2'5' RNA ligase-like domain |
214 |
PF04988
|
A-kinase anchoring protein 95 (AKAP95) |
215 |
PF05716
|
A-kinase anchor protein 110 kDa (AKAP 110) |
216 |
PF12443
|
AT-hook-containing transcription factor |
217 |
PF01262
|
Alanine dehydrogenase/PNT, C-terminal domain |
218 |
PF05222
|
Alanine dehydrogenase/PNT, N-terminal domain |
219 |
PF00842
|
Alanine racemase, C-terminal domain |
220 |
PF01168
|
Alanine racemase, N-terminal domain |
221 |
PF09135
|
Alb1 |
222 |
PF01918
|
Alba |
223 |
PF08027
|
Albumin I |
224 |
PF00171
|
Aldehyde dehydrogenase family |
225 |
PF01263
|
Aldose 1-epimerase |
226 |
PF00248
|
Aldo/keto reductase family |
227 |
PF01315
|
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain |
228 |
PF05208
|
ALG3 protein |
229 |
PF03155
|
ALG6, ALG8 glycosyltransferase family |
230 |
PF11182
|
Alginate O-acetyl transferase AlgF |
231 |
PF05426
|
Alginate lyase |
232 |
PF08787
|
Alginate lyase |
233 |
PF13949
|
ALIX V-shaped domain binding to HIV |
234 |
PF06029
|
AlkA N-terminal domain |
235 |
PF00245
|
Alkaline phosphatase |
236 |
PF03561
|
Allantoicase repeat |
237 |
PF05953
|
Allatostatin |
238 |
PF06351
|
Allene oxide cyclase |
239 |
PF05549
|
Allexivirus 40kDa protein |
240 |
PF04864
|
Allinase |
241 |
PF11744
|
Aluminium activated malate transporter |
242 |
PF06401
|
Alpha-2-macroglobulin RAP, C-terminal domain |
243 |
PF06400
|
Alpha-2-macroglobulin RAP, N-terminal domain |
244 |
PF00128
|
Alpha amylase, catalytic domain |
245 |
PF02806
|
Alpha amylase, C-terminal all-beta domain |
246 |
PF02903
|
Alpha amylase, N-terminal ig-like domain |
247 |
PF09071
|
Alpha-amylase, C terminal |
248 |
PF07821
|
Alpha-amylase C-terminal beta-sheet domain |
249 |
PF04168
|
A predicted alpha-helical domain with a conserved ER motif. |
250 |
PF14456
|
Alpha-helical domain 2 |
251 |
PF06964
|
Alpha-L-arabinofuranosidase C-terminus |
252 |
PF09261
|
Alpha mannosidase, middle domain |
253 |
PF08829
|
Alpha C protein N terminal |
254 |
PF02883
|
Adaptin C-terminal domain |
255 |
PF02296
|
Alpha adaptin AP2, C-terminal domain |
256 |
PF01589
|
Alphavirus E1 glycoprotein |
257 |
PF00943
|
Alphavirus E2 glycoprotein |
258 |
PF01563
|
Alphavirus E3 glycoprotein |
259 |
PF03229
|
Alphavirus glycoprotein J |
260 |
PF02816
|
Alpha-kinase family |
261 |
PF01120
|
Alpha-L-fucosidase |
262 |
PF02232
|
Alpha trans-inducing protein (Alpha-TIF) |
263 |
PF06838
|
Aluminium resistance protein |
264 |
PF02430
|
Apical membrane antigen 1 |
265 |
PF07344
|
Amastin surface glycoprotein |
266 |
PF03913
|
Amb V Allergen |
267 |
PF12475
|
Amdovirus non-structural protein |
268 |
PF05111
|
Ameloblastin precursor (Amelin) |
269 |
PF02948
|
Amelogenin |
270 |
PF04709
|
Anti-Mullerian hormone, N terminal region |
271 |
PF01425
|
Amidase |
272 |
PF02274
|
Amidinotransferase |
273 |
PF01979
|
Amidohydrolase family |
274 |
PF04909
|
Amidohydrolase |
275 |
PF07969
|
Amidohydrolase family |
276 |
PF13147
|
Amidohydrolase |
277 |
PF13594
|
Amidohydrolase |
278 |
PF09663
|
Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) |
279 |
PF11741
|
AMIN domain |
280 |
PF10706
|
Aminoglycoside-2''-adenylyltransferase |
281 |
PF00155
|
Aminotransferase class I and II |
282 |
PF00202
|
Aminotransferase class-III |
283 |
PF01063
|
Aminotransferase class IV |
284 |
PF00266
|
Aminotransferase class-V |
285 |
PF12897
|
Alanine-glyoxylate amino-transferase |
286 |
PF02293
|
AmiS/UreI family transporter |
287 |
PF01871
|
AMMECR1 |
288 |
PF00909
|
Ammonium Transporter Family |
289 |
PF02461
|
Ammonia monooxygenase |
290 |
PF04896
|
Ammonia monooxygenase/methane monooxygenase, subunit C |
291 |
PF03782
|
AMOP domain |
292 |
PF00501
|
AMP-binding enzyme |
293 |
PF05195
|
Aminopeptidase P, N-terminal domain |
294 |
PF01821
|
Anaphylotoxin-like domain |
295 |
PF02166
|
Androgen receptor |
296 |
PF12240
|
Angiomotin C terminal |
297 |
PF00023
|
Ankyrin repeat |
298 |
PF12796
|
Ankyrin repeats (3 copies) |
299 |
PF13606
|
Ankyrin repeat |
300 |
PF13637
|
Ankyrin repeats (many copies) |
301 |
PF13857
|
Ankyrin repeats (many copies) |
302 |
PF00191
|
Annexin |
303 |
PF00212
|
Atrial natriuretic peptide |
304 |
PF03452
|
Anp1 |
305 |
PF08346
|
AntA/AntB antirepressor |
306 |
PF03861
|
ANTAR domain |
307 |
PF07651
|
ANTH domain |
308 |
PF09156
|
Anthrax toxin lethal factor, middle domain |
309 |
PF03497
|
Anthrax toxin LF subunit |
310 |
PF05587
|
Anthrax receptor extracellular domain |
311 |
PF04715
|
Anthranilate synthase component I, N terminal region |
312 |
PF02522
|
Aminoglycoside 3-N-acetyltransferase |
313 |
PF08264
|
Anticodon-binding domain of tRNA |
314 |
PF11410
|
Antifungal peptide |
315 |
PF11402
|
Antifungal protein |
316 |
PF08129
|
Alpha/beta enterocin family |
317 |
PF08256
|
Aurein-like antibiotic peptide |
318 |
PF08024
|
Ant antimicrobial peptide |
319 |
PF03230
|
Antirestriction protein |
320 |
PF02822
|
Antistasin family |
321 |
PF03589
|
Antitermination protein |
322 |
PF04014
|
Antidote-toxin recognition MazE |
323 |
PF05586
|
Anthrax receptor C-terminus region |
324 |
PF03098
|
Animal haem peroxidase |
325 |
PF01786
|
Alternative oxidase |
326 |
PF00847
|
AP2 domain |
327 |
PF02424
|
ApbE family |
328 |
PF12859
|
Anaphase-promoting complex subunit 1 |
329 |
PF03256
|
Anaphase-promoting complex, subunit 10 (APC10) |
330 |
PF05839
|
Apc13p protein |
331 |
PF05841
|
Apc15p protein |
332 |
PF08672
|
Anaphase promoting complex (APC) subunit 2 |
333 |
PF12895
|
Anaphase-promoting complex, cyclosome, subunit 3 |
334 |
PF12896
|
Anaphase-promoting complex, cyclosome, subunit 4 |
335 |
PF12894
|
Anaphase-promoting complex subunit 4 WD40 domain |
336 |
PF12862
|
Anaphase-promoting complex subunit 5 |
337 |
PF04049
|
Anaphase promoting complex subunit 8 / Cdc23 |
338 |
PF12856
|
Anaphase-promoting complex subunit 9 |
339 |
PF05972
|
APC 15 residue motif |
340 |
PF05956
|
APC basic domain |
341 |
PF10471
|
Anaphase-promoting complex APC subunit 1 |
342 |
PF05923
|
APC cysteine-rich region |
343 |
PF04108
|
Autophagy protein Apg17 |
344 |
PF04106
|
Autophagy protein Apg5 |
345 |
PF04111
|
Autophagy protein Apg6 |
346 |
PF04109
|
Autophagy protein Apg9 |
347 |
PF06105
|
Aph-1 protein |
348 |
PF04655
|
Aminoglycoside/hydroxyurea antibiotic resistance kinase |
349 |
PF05918
|
Apoptosis inhibitory protein 5 (API5) |
350 |
PF00807
|
Apidaecin |
351 |
PF05355
|
Apolipoprotein C-II |
352 |
PF05778
|
Apolipoprotein CIII (Apo-CIII) |
353 |
PF05418
|
Apovitellenin I (Apo-VLDL-II) |
354 |
PF04711
|
Apolipoprotein A-II (ApoA-II) |
355 |
PF12491
|
Apolipoprotein B100 C terminal |
356 |
PF05240
|
APOBEC-like C-terminal domain |
357 |
PF08210
|
APOBEC-like N-terminal domain |
358 |
PF04691
|
Apolipoprotein C-I (ApoC-1) |
359 |
PF01333
|
Apocytochrome F, C-terminal |
360 |
PF05461
|
Apolipoprotein L |
361 |
PF01442
|
Apolipoprotein A1/A4/E domain |
362 |
PF07464
|
Apolipophorin-III precursor (apoLp-III) |
363 |
PF11032
|
Apolipoprotein M (ApoM) |
364 |
PF09769
|
Apolipoprotein O |
365 |
PF05634
|
APO RNA-binding |
366 |
PF02177
|
Amyloid A4 N-terminal heparin-binding |
367 |
PF12139
|
Adenosine-5'-phosphosulfate reductase beta subunit |
368 |
PF01583
|
Adenylylsulphate kinase |
369 |
PF03440
|
Aerolysin/Pertussis toxin (APT) domain |
370 |
PF06079
|
Apyrase |
371 |
PF07582
|
AP endonuclease family 2 C terminus |
372 |
PF09206
|
Alpha-L-arabinofuranosidase B, catalytic |
373 |
PF12625
|
Arabinose-binding domain of AraC transcription regulator, N-term |
374 |
PF02311
|
AraC-like ligand binding domain |
375 |
PF06719
|
AraC-type transcriptional regulator N-terminus |
376 |
PF09692
|
Argonaute siRNA chaperone (ARC) complex subunit Arb1 |
377 |
PF09757
|
Arb2 domain |
378 |
PF03869
|
Arc-like DNA binding domain |
379 |
PF12942
|
Archaeal ammonia monooxygenase subunit A (AmoA) |
380 |
PF01951
|
Archease protein family (MTH1598/TM1083) |
381 |
PF01637
|
Archaeal ATPase |
382 |
PF01917
|
Archaebacterial flagellin |
383 |
PF04659
|
Archaeal flagella protein |
384 |
PF06819
|
Archaeal Peptidase A24 C-terminal Domain |
385 |
PF06847
|
Archaeal Peptidase A24 C-terminus Type II |
386 |
PF08394
|
Archaeal TRASH domain |
387 |
PF03079
|
ARD/ARD' family |
388 |
PF07275
|
Antirestriction protein (ArdA) |
389 |
PF00798
|
Arenavirus glycoprotein |
390 |
PF00843
|
Arenavirus nucleocapsid protein |
391 |
PF06317
|
Arenavirus RNA polymerase |
392 |
PF00025
|
ADP-ribosylation factor family |
393 |
PF06456
|
Arfaptin-like domain |
394 |
PF00491
|
Arginase family |
395 |
PF00764
|
Arginosuccinate synthase |
396 |
PF01960
|
ArgJ family |
397 |
PF03308
|
ArgK protein |
398 |
PF11581
|
Antagonist of EGFR signalling, Argos |
399 |
PF01316
|
Arginine repressor, DNA binding domain |
400 |
PF02863
|
Arginine repressor, C-terminal domain |
401 |
PF03485
|
Arginyl tRNA synthetase N terminal domain |
402 |
PF01388
|
ARID/BRIGHT DNA binding domain |
403 |
PF06770
|
Actin-rearrangement-inducing factor (Arif-1) |
404 |
PF00514
|
Armadillo/beta-catenin-like repeat |
405 |
PF04826
|
Armadillo-like |
406 |
PF07302
|
AroM protein |
407 |
PF05856
|
ARP2/3 complex 20 kDa subunit (ARPC4) |
408 |
PF02752
|
Arrestin (or S-antigen), C-terminal domain |
409 |
PF00339
|
Arrestin (or S-antigen), N-terminal domain |
410 |
PF04959
|
Arsenite-resistance protein 2 |
411 |
PF02374
|
Anion-transporting ATPase |
412 |
PF02040
|
Arsenical pump membrane protein |
413 |
PF03960
|
ArsC family |
414 |
PF06953
|
Arsenical resistance operon trans-acting repressor ArsD |
415 |
PF09824
|
ArsR transcriptional regulator |
416 |
PF01606
|
Arterivirus envelope protein |
417 |
PF00951
|
Arterivirus GL envelope glycoprotein |
418 |
PF02497
|
Arterivirus glycoprotein |
419 |
PF01481
|
Arterivirus nucleocapsid protein |
420 |
PF04161
|
Arv1-like family |
421 |
PF01731
|
Arylesterase |
422 |
PF05935
|
Arylsulfotransferase (ASST) |
423 |
PF14269
|
Arylsulfotransferase (ASST) |
424 |
PF00858
|
Amiloride-sensitive sodium channel |
425 |
PF04266
|
ASCH domain |
426 |
PF08688
|
Apx/Shroom domain ASD1 |
427 |
PF08687
|
Apx/Shroom domain ASD2 |
428 |
PF04729
|
ASF1 like histone chaperone |
429 |
PF01671
|
African swine fever virus multigene family 360 protein |
430 |
PF05568
|
African swine fever virus J13L protein |
431 |
PF05293
|
African swine fever virus (ASFV) L11L protein |
432 |
PF09010
|
Anti-Sigma Factor A |
433 |
PF08328
|
Adenylosuccinate lyase C-terminal |
434 |
PF05170
|
AsmA family |
435 |
PF13109
|
AsmA-like C-terminal region |
436 |
PF13502
|
AsmA-like C-terminal region |
437 |
PF03590
|
Aspartate-ammonia ligase |
438 |
PF01037
|
AsnC family |
439 |
PF00733
|
Asparagine synthase |
440 |
PF05279
|
Aspartyl beta-hydroxylase N-terminal region |
441 |
PF03780
|
Asp23 family |
442 |
PF00710
|
Asparaginase |
443 |
PF01112
|
Asparaginase |
444 |
PF05118
|
Aspartyl/Asparaginyl beta-hydroxylase |
445 |
PF02261
|
Aspartate decarboxylase |
446 |
PF01177
|
Asp/Glu/Hydantoin racemase |
447 |
PF09668
|
Aspartyl protease |
448 |
PF13650
|
Aspartyl protease |
449 |
PF06392
|
Acid shock protein repeat |
450 |
PF07100
|
Anabaena sensory rhodopsin transducer |
451 |
PF04958
|
Arginine N-succinyltransferase beta subunit |
452 |
PF01400
|
Astacin (Peptidase family M12A) |
453 |
PF03115
|
Astrovirus capsid protein precursor |
454 |
PF04377
|
Arginine-tRNA-protein transferase, C terminus |
455 |
PF04376
|
Arginine-tRNA-protein transferase, N terminus |
456 |
PF10377
|
Autophagy-related protein 11 |
457 |
PF10033
|
Autophagy-related protein 13 |
458 |
PF08614
|
Autophagy protein 16 (ATG16) |
459 |
PF12744
|
Autophagy protein Atg19, Atg8-binding |
460 |
PF09451
|
Autophagy-related protein 27 |
461 |
PF13329
|
Autophagy-related protein 2 CAD motif |
462 |
PF09795
|
Autophagy-related protein 31 |
463 |
PF02991
|
Autophagy protein Atg8 ubiquitin like |
464 |
PF09333
|
ATG C terminal domain |
465 |
PF03078
|
ATHILA ORF-1 family |
466 |
PF07737
|
Anthrax toxin lethal factor, N- and C-terminal domain |
467 |
PF03477
|
ATP cone domain |
468 |
PF02222
|
ATP-grasp domain |
469 |
PF08442
|
ATP-grasp domain |
470 |
PF02655
|
ATP-grasp domain |
471 |
PF13535
|
ATP-grasp domain |
472 |
PF13549
|
ATP-grasp domain |
473 |
PF00217
|
ATP:guanido phosphotransferase, C-terminal catalytic domain |
474 |
PF02807
|
ATP:guanido phosphotransferase, N-terminal domain |
475 |
PF01747
|
ATP-sulfurylase |
476 |
PF00231
|
ATP synthase |
477 |
PF05176
|
ATP10 protein |
478 |
PF00895
|
ATP synthase protein 8 |
479 |
PF00119
|
ATP synthase A chain |
480 |
PF00006
|
ATP synthase alpha/beta family, nucleotide-binding domain |
481 |
PF00306
|
ATP synthase alpha/beta chain, C terminal domain |
482 |
PF02874
|
ATP synthase alpha/beta family, beta-barrel domain |
483 |
PF00430
|
ATP synthase B/B' CF(0) |
484 |
PF00137
|
ATP synthase subunit C |
485 |
PF01813
|
ATP synthase subunit D |
486 |
PF00401
|
ATP synthase, Delta/Epsilon chain, long alpha-helix domain |
487 |
PF02823
|
ATP synthase, Delta/Epsilon chain, beta-sandwich domain |
488 |
PF05680
|
ATP synthase E chain |
489 |
PF08112
|
ATP synthase epsilon subunit |
490 |
PF01990
|
ATP synthase (F/14-kDa) subunit |
491 |
PF04911
|
ATP synthase j chain |
492 |
PF06644
|
ATP11 protein |
493 |
PF07542
|
ATP12 chaperone protein |
494 |
PF02038
|
ATP1G1/PLM/MAT8 family |
495 |
PF01902
|
ATP-binding region |
496 |
PF10775
|
ATP synthase complex subunit h |
497 |
PF05493
|
ATP synthase subunit H |
498 |
PF03899
|
ATP synthase I chain |
499 |
PF09830
|
ATP adenylyltransferase |
500 |
PF03154
|
Atrophin-1 family |
501 |
PF03769
|
Attacin, C-terminal region |
502 |
PF03768
|
Attacin, N-terminal region |
503 |
PF08037
|
Attractin family |
504 |
PF11512
|
Agrobacterium tumefaciens protein Atu4866 |
505 |
PF08098
|
Anemonia sulcata toxin III family |
506 |
PF02178
|
AT hook motif |
507 |
PF09041
|
Aurora-A binding |
508 |
PF03472
|
Autoinducer binding domain |
509 |
PF00765
|
Autoinducer synthetase |
510 |
PF03987
|
Autophagocytosis associated protein, active-site domain |
511 |
PF10381
|
Autophagocytosis associated protein C-terminal |
512 |
PF03986
|
Autophagocytosis associated protein (Atg3), N-terminal domain |
513 |
PF03797
|
Autotransporter beta-domain |
514 |
PF12951
|
Autotransporter-associated beta strand repeat |
515 |
PF02041
|
Auxin binding protein |
516 |
PF05703
|
Auxin canalisation |
517 |
PF02519
|
Auxin responsive protein |
518 |
PF06507
|
Auxin response factor |
519 |
PF02309
|
AUX/IAA family |
520 |
PF03708
|
Avian retrovirus envelope protein, gp85 |
521 |
PF01382
|
Avidin family |
522 |
PF05394
|
Avirulence protein |
523 |
PF09143
|
AvrPphF-ORF-2 |
524 |
PF09046
|
AvrPtoB E3 ubiquitin ligase |
525 |
PF06536
|
Avian adenovirus fibre |
526 |
PF05512
|
AWPM-19-like family |
527 |
PF05448
|
Acetyl xylan esterase (AXE1) |
528 |
PF08517
|
Ataxin-1 and HBP1 module (AXH) |
529 |
PF08833
|
Axin beta-catenin binding domain |
530 |
PF10211
|
Axonemal dynein light chain |
531 |
PF03591
|
AzlC protein |
532 |
PF01356
|
Alpha amylase inhibitor |
533 |
PF02137
|
Adenosine-deaminase (editase) domain |
534 |
PF00962
|
Adenosine/AMP deaminase |
535 |
PF08451
|
Adenosine/AMP deaminase N-terminal |
536 |
PF11758
|
Aureocin-like type II bacteriocin |
537 |
PF08531
|
Alpha-L-rhamnosidase N-terminal domain |
538 |
PF07584
|
Aerotolerance regulator N-terminal |
539 |
PF00452
|
Apoptosis regulator proteins, Bcl-2 family |
540 |
PF04775
|
Acyl-CoA thioester hydrolase/BAAT N-terminal region |
541 |
PF14399
|
A predicted NlpC/p60-like peptidase |
542 |
PF08603
|
Adenylate cyclase associated (CAP) C terminal |
543 |
PF01213
|
Adenylate cyclase associated (CAP) N terminal |
544 |
PF03233
|
Aphid transmission protein |
545 |
PF01955
|
Adenosylcobinamide amidohydrolase |
546 |
PF11105
|
Arthropod cardioacceleratory peptide 2a |
547 |
PF01874
|
ATP:dephospho-CoA triphosphoribosyl transferase |
548 |
PF03802
|
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase |
549 |
PF02617
|
ATP-dependent Clp protease adaptor protein ClpS |
550 |
PF02572
|
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP |
551 |
PF04174
|
A circularly permuted ATPgrasp |
552 |
PF00525
|
Alpha crystallin A chain, N terminal |
553 |
PF06002
|
Alpha-2,3-sialyltransferase (CST-I) |
554 |
PF03605
|
Anaerobic c4-dicarboxylate membrane transporter |
555 |
PF04693
|
Archaeal putative transposase ISC1217 |
556 |
PF01097
|
Arthropod defensin |
557 |
PF04679
|
ATP dependent DNA ligase C terminal region |
558 |
PF01068
|
ATP dependent DNA ligase domain |
559 |
PF09750
|
Alternative splicing regulator |
560 |
PF06342
|
Alpha/beta hydrolase of unknown function (DUF1057) |
561 |
PF06500
|
Alpha/beta hydrolase of unknown function (DUF1100) |
562 |
PF07176
|
Alpha/beta hydrolase of unknown function (DUF1400) |
563 |
PF03008
|
Archaea bacterial proteins of unknown function |
564 |
PF03087
|
Arabidopsis protein of unknown function |
565 |
PF12458
|
ATPase involved in DNA repair |
566 |
PF12481
|
Aluminium induced protein |
567 |
PF12558
|
ATP-binding cassette cobalt transporter |
568 |
PF12568
|
Acetyltransferase (GNAT) domain |
569 |
PF04894
|
Archaeal protein of unknown function (DUF650) |
570 |
PF04895
|
Archaeal protein of unknown function (DUF651) |
571 |
PF05990
|
Alpha/beta hydrolase of unknown function (DUF900) |
572 |
PF06023
|
Archaeal protein of unknown function (DUF911) |
573 |
PF06028
|
Alpha/beta hydrolase of unknown function (DUF915) |
574 |
PF13651
|
Adenine-specific methyltransferase EcoRI |
575 |
PF04863
|
Alliinase EGF-like domain |
576 |
PF12761
|
Actin cytoskeleton-regulatory complex protein END3 |
577 |
PF09403
|
Adhesion protein FadA |
578 |
PF09252
|
Allergen Fel d I-B chain |
579 |
PF11575
|
Acidic fibroblast growth factor binding (FIBP) |
580 |
PF02119
|
Anti-sigma-28 factor, FlgM |
581 |
PF04500
|
Acetamidase/Formamidase family |
582 |
PF04572
|
Alpha 1,4-glycosyltransferase conserved region |
583 |
PF01571
|
Aminomethyltransferase folate-binding domain |
584 |
PF06202
|
Amylo-alpha-1,6-glucosidase |
585 |
PF13856
|
ATP-binding sugar transporter from pro-phage |
586 |
PF12899
|
Alkaline and neutral invertase |
587 |
PF03901
|
Alg9-like mannosyltransferase family |
588 |
PF08444
|
Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region |
589 |
PF06021
|
Aralkyl acyl-CoA:amino acid N-acyltransferase |
590 |
PF00211
|
Adenylate and Guanylate cyclase catalytic domain |
591 |
PF13749
|
ATP-dependent DNA helicase recG C-terminal |
592 |
PF07111
|
Alpha helical coiled-coil rod protein (HCR) |
593 |
PF02480
|
Alphaherpesvirus glycoprotein E |
594 |
PF01688
|
Alphaherpesvirus glycoprotein I |
595 |
PF06072
|
Alphaherpesvirus tegument protein US9 |
596 |
PF03129
|
Anticodon binding domain |
597 |
PF12745
|
Anticodon binding domain of tRNAs |
598 |
PF01634
|
ATP phosphoribosyltransferase |
599 |
PF01870
|
Archaeal holliday junction resolvase (hjc) |
600 |
PF08482
|
ATP-dependent helicase C-terminal |
601 |
PF13404
|
AsnC-type helix-turn-helix domain |
602 |
PF01450
|
Acetohydroxy acid isomeroreductase, catalytic domain |
603 |
PF07991
|
Acetohydroxy acid isomeroreductase, catalytic domain |
604 |
PF11956
|
Ankyrin-G binding motif of KCNQ2-3 |
605 |
PF13002
|
Arrestin_N terminal like |
606 |
PF00556
|
Antenna complex alpha/beta subunit |
607 |
PF14411
|
A nuclease of the HNH/ENDO VII superfamily with conserved LHH |
608 |
PF07746
|
Aromatic-ring-opening dioxygenase LigAB, LigA subunit |
609 |
PF01540
|
Adhesin lipoprotein |
610 |
PF06261
|
Actinobacillus actinomycetemcomitans leukotoxin activator LktC |
611 |
PF14421
|
A distinct subfamily of CDD/CDA-like deaminases |
612 |
PF02190
|
ATP-dependent protease La (LON) domain |
613 |
PF05893
|
Acyl-CoA reductase (LuxC) |
614 |
PF04443
|
Acyl-protein synthetase, LuxE |
615 |
PF00221
|
Aromatic amino acid lyase |
616 |
PF11099
|
Apoptosis regulator M11L like |
617 |
PF10545
|
Alcohol dehydrogenase transcription factor Myb/SANT-like |
618 |
PF09606
|
ARC105 or Med15 subunit of Mediator complex non-fungal |
619 |
PF03243
|
Alkylmercury lyase |
620 |
PF05891
|
AdoMet dependent proline di-methyltransferase |
621 |
PF11974
|
Alpha-2-macroglobulin MG1 domain |
622 |
PF09140
|
ATPase MipZ |
623 |
PF05873
|
ATP synthase D chain, mitochondrial (ATP5H) |
624 |
PF01513
|
ATP-NAD kinase |
625 |
PF05089
|
Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain |
626 |
PF12972
|
Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain |
627 |
PF12971
|
Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain |
628 |
PF08637
|
ATP synthase regulation protein NCA2 |
629 |
PF08619
|
Alkali metal cation/H+ antiporter Nha1 C terminus |
630 |
PF13597
|
Anaerobic ribonucleoside-triphosphate reductase |
631 |
PF02071
|
Aromatic-di-Alanine (AdAR) repeat |
632 |
PF03146
|
Agrin NtA domain |
633 |
PF11602
|
ATPase P4 of dsRNA bacteriophage phi-12 |
634 |
PF08133
|
Anticodon nuclease activator family |
635 |
PF14448
|
A short region before toxin nuclease domain |
636 |
PF00213
|
ATP synthase delta (OSCP) subunit |
637 |
PF00185
|
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain |
638 |
PF02729
|
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain |
639 |
PF04699
|
ARP2/3 complex 16 kDa subunit (p16-Arc) |
640 |
PF04062
|
ARP2/3 complex ARPC3 (21 kDa) subunit |
641 |
PF00864
|
ATP P2X receptor |
642 |
PF04045
|
Arp2/3 complex, 34 kD subunit p34-Arc |
643 |
PF02331
|
Apoptosis preventing protein |
644 |
PF07017
|
Antimicrobial peptide resistance and lipid A acylation protein PagP |
645 |
PF07145
|
Ataxin-2 C-terminal region |
646 |
PF03333
|
Adhesin biosynthesis transcription regulatory protein |
647 |
PF09386
|
Antitoxin ParD |
648 |
PF05942
|
Archaeal PaREP1/PaREP8 family |
649 |
PF07418
|
Acidic phosphoprotein precursor PCEMA1 |
650 |
PF05278
|
Arabidopsis phospholipase-like protein (PEARLI 4) |
651 |
PF00770
|
Adenovirus endoprotease |
652 |
PF02127
|
Aminopeptidase I zinc metalloprotease (M18) |
653 |
PF01401
|
Angiotensin-converting enzyme |
654 |
PF00716
|
Assemblin (Peptidase family S21) |
655 |
PF00944
|
Alphavirus core protein |
656 |
PF10554
|
Ash protein family |
657 |
PF02604
|
Antitoxin Phd_YefM, type II toxin-antitoxin system |
658 |
PF02912
|
Aminoacyl tRNA synthetase class II, N-terminal domain |
659 |
PF12974
|
ABC transporter, phosphonate, periplasmic substrate-binding protein |
660 |
PF08114
|
ATPase proteolipid family |
661 |
PF11565
|
Alpha helical Porin B |
662 |
PF07526
|
Associated with HOX |
663 |
PF04835
|
A9 protein conserved region |
664 |
PF07530
|
Associated with zinc fingers |
665 |
PF02983
|
Alpha-lytic protease prodomain |
666 |
PF07276
|
Apopolysialoglycoprotein (PSGP) |
667 |
PF14449
|
A pre-toxin domain with the TG motif |
668 |
PF11468
|
Aromatic prenyltransferase Orf2 |
669 |
PF01948
|
Aspartate carbamoyltransferase regulatory chain, allosteric domain |
670 |
PF02748
|
Aspartate carbamoyltransferase regulatory chain, metal binding domain |
671 |
PF11058
|
Antirestriction protein Ral |
672 |
PF11495
|
Archaeal transcriptional regulator TrmB |
673 |
PF12910
|
Antitoxin of toxin-antitoxin stability system N-terminal |
674 |
PF09545
|
AccI restriction endonuclease |
675 |
PF09491
|
AlwI restriction endonuclease |
676 |
PF09499
|
ApaLI-like restriction endonuclease |
677 |
PF10413
|
Amino terminal of the G-protein receptor rhodopsin |
678 |
PF02267
|
ADP-ribosyl cyclase |
679 |
PF06870
|
A49-like RNA polymerase I associated factor |
680 |
PF13446
|
A repeated domain in UCH-protein |
681 |
PF05659
|
Arabidopsis broad-spectrum mildew resistance protein RPW8 |
682 |
PF03873
|
Anti sigma-E protein RseA, C-terminal domain |
683 |
PF03872
|
Anti sigma-E protein RseA, N-terminal domain |
684 |
PF12791
|
Anti-sigma factor N-terminus |
685 |
PF10099
|
Anti-sigma-K factor rskA |
686 |
PF01536
|
Adenosylmethionine decarboxylase |
687 |
PF08671
|
Anti-repressor SinI |
688 |
PF14185
|
Antitoxin SpoIISB, type II toxin-antitoxin system |
689 |
PF14419
|
AF2226-like SPOUT RNA Methylase fused to THUMP |
690 |
PF11414
|
Adenomatous polyposis coli tumour suppressor protein |
691 |
PF11421
|
ATP synthase F1 beta subunit |
692 |
PF11406
|
Antimicrobial peptide tachystatin A |
693 |
PF11478
|
Antimicrobial chitin binding protein tachystatin B |
694 |
PF07706
|
Aminotransferase ubiquitination site |
695 |
PF14246
|
AefR-like transcriptional repressor, C-terminal region |
696 |
PF10569
|
Alpha-macro-globulin thiol-ester bond-forming region |
697 |
PF07829
|
Alpha-A conotoxin PIVA-like protein |
698 |
PF11415
|
Antifungal peptide termicin |
699 |
PF00706
|
Anenome neurotoxin |
700 |
PF07365
|
Alpha conotoxin precursor |
701 |
PF08164
|
Apoptosis-antagonizing transcription factor, C-terminal |
702 |
PF08915
|
Archaea-specific editing domain of threonyl-tRNA synthetase |
703 |
PF11613
|
Agonist of corticotropin releasing factor R2, Urocortin-2 |
704 |
PF07593
|
ASPIC and UnbV |
705 |
PF11637
|
ATP-dependant DNA helicase UvsW |
706 |
PF01992
|
ATP synthase (C/AC39) subunit |
707 |
PF01991
|
ATP synthase (E/31 kDa) subunit |
708 |
PF10537
|
ATP-utilising chromatin assembly and remodelling N-terminal |
709 |
PF14077
|
Alternative WD40 repeat motif |
710 |
PF14414
|
A nuclease of the HNH/ENDO VII superfamily with conserved WHH |
711 |
PF06505
|
Activator of aromatic catabolism |
712 |
PF02295
|
Adenosine deaminase z-alpha domain |
713 |
PF08632
|
Activator of mitotic machinery Cdc14 phosphatase activation C-term |
714 |
PF01754
|
A20-like zinc finger |
715 |
PF01428
|
AN1-like Zinc finger |
716 |
PF12861
|
Anaphase-promoting complex subunit 11 RING-H2 finger |