3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00212

Details:

PFam ID : PF00212

PFam Domain Description : Atrial natriuretic peptide

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 122

Average sequence length: 31.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00212	C5LKD5_9ALVE_244_359	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00212	DNP_DENAN_1_23	100

Sequence based PCA Plot of the family - PF00212 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=7 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay