3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02496

Details:

PFam ID : PF02496

PFam Domain Description : ABA/WDS induced protein

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 70

Average sequence length: 70.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02496	E7AXL8_9VIRU_1_40	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02496	F1BU58_PINSY_1_25	100

Sequence based PCA Plot of the family - PF02496 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay