3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08833

Details:

PFam ID : PF08833

PFam Domain Description : Axin beta-catenin binding domain

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 29

Average sequence length: 41.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08833	AXIN1_MOUSE_463_497	50

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08833	E4WXG1_OIKDI_31_80	96.4

Sequence based PCA Plot of the family - PF08833 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=10 Length=18
Motif2 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay