3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02522

Details:

PFam ID : PF02522

PFam Domain Description : Aminoglycoside 3-N-acetyltransferase

Number of Sequence in 50% Dataset : 94

Number of Sequence in Full Dataset : 223

Average sequence length: 209.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02522	D8JAL2_HALJB_99_280	81.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02522	AACC9_MICCH_35_278	100

Sequence based PCA Plot of the family - PF02522 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=66 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay