3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10381

Details:

PFam ID : PF10381

PFam Domain Description : Autophagocytosis associated protein C-terminal

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 65

Average sequence length: 24.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10381	B6K0V5_SCHJY_223_473	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10381	A2DRY6_TRIVA_229_253	96.8

Sequence based PCA Plot of the family - PF10381 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay