3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02071

Details:

PFam ID : PF02071

PFam Domain Description : Aromatic-di-Alanine (AdAR) repeat

Number of Sequence in 50% Dataset : 58

Number of Sequence in Full Dataset : 59

Average sequence length: 12.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02071	F1STF6_PIG_120_134	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02071	E7D1D9_9ARAC_137_148	22

Sequence based PCA Plot of the family - PF02071 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay