3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07859

Details:

PFam ID : PF07859

PFam Domain Description : alpha/beta hydrolase fold

Number of Sequence in 50% Dataset : 1324

Number of Sequence in Full Dataset : 5128

Average sequence length: 186.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07859	E4X8E1_OIKDI_291_396	92.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07859	Q45559_BACSU_205_322	100

Sequence based PCA Plot of the family - PF07859 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=47 Length=28
Motif2 Start=92 Length=8
Motif3 Start=2 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay