3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01401

Details:

PFam ID : PF01401

PFam Domain Description : Angiotensin-converting enzyme

Number of Sequence in 50% Dataset : 82

Number of Sequence in Full Dataset : 303

Average sequence length: 460.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01401	ACE_BOVIN_31_100	98.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01401	F0J9K0_AMBVA_1_233	100

Sequence based PCA Plot of the family - PF01401 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=325 Length=8
Motif2 Start=244 Length=11
Motif3 Start=217 Length=11
Motif4 Start=565 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay