3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01553

Details:

PFam ID : PF01553

PFam Domain Description : Acyltransferase

Number of Sequence in 50% Dataset : 755

Number of Sequence in Full Dataset : 5528

Average sequence length: 135.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01553	B4DHC0_HUMAN_70_176	91.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01553	E1GLR3_LOALO_7_98	99.6

Sequence based PCA Plot of the family - PF01553 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=1 Length=11
Motif2 Start=14 Length=8
Motif3 Start=186 Length=8
Motif4 Start=162 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay