3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF05191

Details:

PFam ID : PF05191

PFam Domain Description : Adenylate kinase, active site lid

Number of Sequence in 50% Dataset : 9

Number of Sequence in Full Dataset : 941

Average sequence length: 35.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05191	F1S564_PIG_215_290	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF05191	D6HBS0_STAAU_127_148	94.5

Sequence based PCA Plot of the family - PF05191 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=3 Length=20

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay