3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10569

Details:

PFam ID : PF10569

PFam Domain Description : Alpha-macro-globulin thiol-ester bond-forming region

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 314

Average sequence length: 29.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10569	Q0PQ28_ASTRU_1_21	75

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10569	A0T1S7_ANOST_1_19	100

Sequence based PCA Plot of the family - PF10569 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay