3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13382

Details:

PFam ID : PF13382

PFam Domain Description : Adenine deaminase C-terminal domain

Number of Sequence in 50% Dataset : 45

Number of Sequence in Full Dataset : 485

Average sequence length: 166.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13382	B3TAG9_9ARCH_256_316	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13382	E0STV5_IGNAA_432_605	100

Sequence based PCA Plot of the family - PF13382 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=1 Length=8
Motif2 Start=29 Length=8
Motif3 Start=63 Length=28

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay