3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF04709

Details:

PFam ID : PF04709

PFam Domain Description : Anti-Mullerian hormone, N terminal region

Number of Sequence in 50% Dataset : 22

Number of Sequence in Full Dataset : 36

Average sequence length: 235.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04709	C0KIY1_ONCMY_1_242	9.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF04709	D2HTL9_AILME_44_278	97.1

Sequence based PCA Plot of the family - PF04709 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay