3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07751

Details:

PFam ID : PF07751

PFam Domain Description : Abi-like protein

Number of Sequence in 50% Dataset : 382

Number of Sequence in Full Dataset : 625

Average sequence length: 174.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07751	E0JUU9_RHIME_72_207	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07751	E4I6R4_ENTFC_29_306	100

Sequence based PCA Plot of the family - PF07751 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=160 Length=8
Motif2 Start=8 Length=18
Motif3 Start=48 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay