3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07464

Details:

PFam ID : PF07464

PFam Domain Description : Apolipophorin-III precursor (apoLp-III)

Number of Sequence in 50% Dataset : 18

Number of Sequence in Full Dataset : 32

Average sequence length: 136.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07464	A9BYQ9_DELAS_12_69	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07464	E2BCC1_9HYME_45_196	96.7

Sequence based PCA Plot of the family - PF07464 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay