3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09236

Details:

PFam ID : PF09236

PFam Domain Description : Alpha-haemoglobin stabilising protein

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 9

Average sequence length: 73.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09236	C2S4X4_BACCE_43_95	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09236	A8VIE7_SHEEP_1_84	100

Sequence based PCA Plot of the family - PF09236 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay