3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF01757

Details:

PFam ID : PF01757

PFam Domain Description : Acyltransferase family

Number of Sequence in 50% Dataset : 2569

Number of Sequence in Full Dataset : 5139

Average sequence length: 328.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01757	E1ZBN7_9CHLO_72_527	99.0

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF01757	C4S8V6_YERMO_9_191	99.9

Sequence based PCA Plot of the family - PF01757 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=124 Length=11
Motif2 Start=67 Length=20
Motif3 Start=195 Length=23
Motif4 Start=392 Length=23

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay