3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00217

Details:

PFam ID : PF00217

PFam Domain Description : ATP:guanido phosphotransferase, C-terminal catalytic domain

Number of Sequence in 50% Dataset : 78

Number of Sequence in Full Dataset : 494

Average sequence length: 220.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00217	D6S8I6_PEPMA_1_231	83.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00217	F0SME3_PLABD_18_93	100

Sequence based PCA Plot of the family - PF00217 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=27
Motif2 Start=95 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay