No. |
Link to 3pfdb+ |
Pfam Description |
1 |
PF03930
|
flt3 ligand |
2 |
PF04799
|
fzo-like conserved region |
3 |
PF11591
|
Ferredoxin chloroplastic transit peptide |
4 |
PF12729
|
Four helix bundle sensory module for signal transduction |
5 |
PF13840
|
Family description |
6 |
PF11606
|
Family 31 carbohydrate binding protein |
7 |
PF12190
|
Fungal protease inhibitor |
8 |
PF01593
|
Flavin containing amine oxidoreductase |
9 |
PF08106
|
Formaecin family |
10 |
PF08018
|
Frog antimicrobial peptide |
11 |
PF08023
|
Frog antimicrobial peptide |
12 |
PF01312
|
FlhB HrpN YscU SpaS Family |
13 |
PF00734
|
Fungal cellulose binding domain |
14 |
PF12192
|
Fungal calcium binding protein |
15 |
PF01410
|
Fibrillar collagen C-terminal domain |
16 |
PF06934
|
Fatty acid cis/trans isomerase (CTI) |
17 |
PF05848
|
Firmicute transcriptional repressor of class III stress genes (CtsR) |
18 |
PF01266
|
FAD dependent oxidoreductase |
19 |
PF10391
|
Fingers domain of DNA polymerase lambda |
20 |
PF06346
|
Formin Homology Region 1 |
21 |
PF13386
|
Family description |
22 |
PF06267
|
Family of unknown function (DUF1028) |
23 |
PF06280
|
Fn3-like domain (DUF1034) |
24 |
PF08217
|
Fungal domain of unknown function (DUF1712) |
25 |
PF08432
|
Fungal protein of unknown function (DUF1742) |
26 |
PF08508
|
Fungal domain of unknown function (DUF1746) |
27 |
PF08520
|
Fungal protein of unknown function (DUF1748) |
28 |
PF08550
|
Fungal protein of unknown function (DUF1752) |
29 |
PF08589
|
Fungal protein of unknown function (DUF1770) |
30 |
PF08611
|
Fungal protein of unknown function (DUF1774) |
31 |
PF08643
|
Fungal family of unknown function (DUF1776) |
32 |
PF09428
|
Fungal protein of unknown function (DUF2011) |
33 |
PF09435
|
Fungal protein of unknown function (DUF2015) |
34 |
PF12421
|
Fibronectin type III protein |
35 |
PF12545
|
Filamentous haemagglutinin family outer membrane protein |
36 |
PF12930
|
Family of unknown function (DUF3836) |
37 |
PF13179
|
Family of unknown function (DUF4006) |
38 |
PF04282
|
Family of unknown function (DUF438) |
39 |
PF04357
|
Family of unknown function (DUF490) |
40 |
PF04366
|
Family of unknown function (DUF500) |
41 |
PF04484
|
Family of unknown function (DUF566) |
42 |
PF04502
|
Family of unknown function (DUF572) |
43 |
PF04510
|
Family of unknown function (DUF577) |
44 |
PF04816
|
Family of unknown function (DUF633) |
45 |
PF04890
|
Family of unknown function (DUF648) |
46 |
PF04920
|
Family of unknown function (DUF656) |
47 |
PF05107
|
Family of unknown function (DUF694) |
48 |
PF05117
|
Family of unknown function (DUF695) |
49 |
PF05153
|
Family of unknown function (DUF706) |
50 |
PF04819
|
Family of unknown function (DUF716) |
51 |
PF09645
|
F-112 protein |
52 |
PF01267
|
F-actin capping protein alpha subunit |
53 |
PF00646
|
F-box domain |
54 |
PF12937
|
F-box-like |
55 |
PF13013
|
F-box-like domain |
56 |
PF01996
|
F420-0:Gamma-glutamyl ligase |
57 |
PF00754
|
F5/8 type C domain |
58 |
PF08736
|
FERM adjacent (FA) |
59 |
PF01557
|
Fumarylacetoacetate (FAA) hydrolase family |
60 |
PF07977
|
FabA-like domain |
61 |
PF02913
|
FAD linked oxidases, C-terminal domain |
62 |
PF07840
|
FadR C-terminal domain |
63 |
PF00667
|
FAD binding domain |
64 |
PF00890
|
FAD binding domain |
65 |
PF01494
|
FAD binding domain |
66 |
PF01565
|
FAD binding domain |
67 |
PF00941
|
FAD binding domain in molybdopterin dehydrogenase |
68 |
PF03441
|
FAD binding domain of DNA photolyase |
69 |
PF08022
|
FAD-binding domain |
70 |
PF12831
|
FAD dependent oxidoreductase |
71 |
PF06574
|
FAD synthetase |
72 |
PF08714
|
Formaldehyde-activating enzyme (Fae) |
73 |
PF08392
|
FAE1/Type III polyketide synthase-like protein |
74 |
PF04703
|
FaeA-like protein |
75 |
PF06905
|
Fas apoptotic inhibitory molecule (FAIM1) |
76 |
PF06730
|
FAM92 protein |
77 |
PF11107
|
Fanconi anemia group F protein (FANCF) |
78 |
PF11793
|
FANCL C-terminal domain |
79 |
PF03511
|
Fanconi anaemia group A protein |
80 |
PF02106
|
Fanconi anaemia group C protein |
81 |
PF07174
|
Fibronectin-attachment protein (FAP) |
82 |
PF01149
|
Formamidopyrimidine-DNA glycosylase N-terminal domain |
83 |
PF04750
|
FAR-17a/AIG1-like protein |
84 |
PF03101
|
FAR1 DNA-binding domain |
85 |
PF01581
|
FMRFamide related peptide family |
86 |
PF02469
|
Fasciclin domain |
87 |
PF06268
|
Fascin domain |
88 |
PF06743
|
FAST kinase-like protein, subdomain 1 |
89 |
PF08368
|
FAST kinase-like protein, subdomain 2 |
90 |
PF02259
|
FAT domain |
91 |
PF02260
|
FATC domain |
92 |
PF00487
|
Fatty acid desaturase |
93 |
PF03405
|
Fatty acid desaturase |
94 |
PF11510
|
Fanconi Anaemia group E protein FANCE |
95 |
PF04116
|
Fatty acid hydroxylase superfamily |
96 |
PF02504
|
Fatty acid synthesis protein |
97 |
PF04300
|
F-box associated region |
98 |
PF07734
|
F-box associated |
99 |
PF07735
|
F-box associated |
100 |
PF08268
|
F-box associated domain |
101 |
PF08387
|
FBD |
102 |
PF07299
|
Fibronectin-binding protein (FBP) |
103 |
PF05833
|
Fibronectin-binding protein A N-terminus (FbpA) |
104 |
PF00316
|
Fructose-1-6-bisphosphatase |
105 |
PF06874
|
Firmicute fructose-1,6-bisphosphatase |
106 |
PF01950
|
Fructose-1,6-bisphosphatase |
107 |
PF07367
|
Fungal fruit body lectin |
108 |
PF08341
|
Fibronectin-binding protein signal sequence |
109 |
PF07729
|
FCD domain |
110 |
PF04900
|
Fcf1 |
111 |
PF08698
|
Fcf2 pre-rRNA processing |
112 |
PF00611
|
Fes/CIP4, and EFC/F-BAR homology domain |
113 |
PF10862
|
FcoT-like thioesterase domain |
114 |
PF09309
|
FCP1, C-terminal |
115 |
PF09242
|
Flavocytochrome c sulphide dehydrogenase, flavin-binding |
116 |
PF09532
|
FDF domain |
117 |
PF02634
|
FdhD/NarQ family |
118 |
PF03147
|
Ferredoxin-fold anticodon binding domain |
119 |
PF01032
|
FecCD transport family |
120 |
PF04773
|
FecR protein |
121 |
PF05666
|
Fels-1 Prophage Protein-like |
122 |
PF02388
|
FemAB family |
123 |
PF04023
|
FeoA domain |
124 |
PF07664
|
Ferrous iron transport protein B C terminus |
125 |
PF02421
|
Ferrous iron transport protein B |
126 |
PF09012
|
FeoC like transcriptional regulator |
127 |
PF00142
|
FerA (NUC095) domain |
128 |
PF08165
|
FerB (NUC096) domain |
129 |
PF08150
|
FerI (NUC094) domain |
130 |
PF08151
|
FERM C-terminal PH-like domain |
131 |
PF09380
|
FERM central domain |
132 |
PF00373
|
FERM N-terminal domain |
133 |
PF09379
|
Ferric reductase like transmembrane component |
134 |
PF01794
|
Ferritin-like domain |
135 |
PF00210
|
Ferritin-like |
136 |
PF12902
|
Ferritin-like domain |
137 |
PF13668
|
Ferrochelatase |
138 |
PF08609
|
Ferredoxin thioredoxin reductase variable alpha chain |
139 |
PF02941
|
Ferredoxin thioredoxin reductase catalytic beta chain |
140 |
PF02943
|
FEZ-like protein |
141 |
PF07763
|
Fez1 |
142 |
PF06818
|
Ferredoxin-dependent bilin reductase |
143 |
PF02256
|
FF domain |
144 |
PF01846
|
FG-GAP repeat |
145 |
PF01839
|
FG-GAP repeat |
146 |
PF05013
|
Formylglycine-generating sulfatase enzyme |
147 |
PF03781
|
Fibroblast growth factor |
148 |
PF00167
|
FGF binding protein 1 (FGF-BP1) |
149 |
PF06473
|
FGGY family of carbohydrate kinases, C-terminal domain |
150 |
PF02782
|
FGGY family of carbohydrate kinases, N-terminal domain |
151 |
PF00370
|
Formin Homology 2 Domain |
152 |
PF02181
|
FHA domain |
153 |
PF00498
|
FHIPEP family |
154 |
PF00771
|
Ferric iron reductase FhuF-like transporter |
155 |
PF06276
|
FhuF 2Fe-2S C-terminal domain |
156 |
PF05427
|
Fibrillarin |
157 |
PF01269
|
Fibrillarin-like archaeal protein |
158 |
PF10113
|
Fibrinogen alpha C domain |
159 |
PF12160
|
Fibrinogen binding protein |
160 |
PF08017
|
Fibrinogen beta and gamma chains, C-terminal globular domain |
161 |
PF00147
|
Fibritin C-terminal region |
162 |
PF07921
|
Fibroin P25 |
163 |
PF07294
|
Fibrinogen alpha/beta chain family |
164 |
PF08702
|
Fibrobacter succinogenes major domain (Fib_succ_major) |
165 |
PF09603
|
Fic/DOC family |
166 |
PF02661
|
Fic/DOC family N-terminal |
167 |
PF12351
|
Function to find |
168 |
PF13553
|
Fijivirus P9-2 protein |
169 |
PF06837
|
Fijivirus 64 kDa capsid protein |
170 |
PF05880
|
Filaggrin |
171 |
PF04732
|
Filamin/ABP280 repeat |
172 |
PF00630
|
Filovirus glycoprotein |
173 |
PF01611
|
Filovirus membrane-associated protein VP24 |
174 |
PF06389
|
Filoviridae VP35 |
175 |
PF13332
|
Fimbrial adhesin F17-AG, lectin domain |
176 |
PF09222
|
Fimbrial protein |
177 |
PF04449
|
Fimbrial, major and minor subunit |
178 |
PF02432
|
FimH, mannose binding |
179 |
PF09160
|
Fms-interacting protein |
180 |
PF09766
|
Fertility inhibition protein N terminal |
181 |
PF12602
|
Fip1 motif |
182 |
PF05182
|
FIST N domain |
183 |
PF08495
|
FIST C domain |
184 |
PF07554
|
FixH |
185 |
PF05545
|
FKBP-type peptidyl-prolyl cis-trans isomerase |
186 |
PF14288
|
Flagellar filament outer layer protein Flaa |
187 |
PF04620
|
Flagella accessory protein C (FlaC) |
188 |
PF05377
|
Flagellar basal body protein FlaE |
189 |
PF07559
|
Flagellar protein FlaF |
190 |
PF07309
|
FlaG protein |
191 |
PF00700
|
Flagellin D3 domain |
192 |
PF08884
|
Flagellin hook IN motif |
193 |
PF00669
|
Flavin reductase like domain |
194 |
PF01613
|
Flavivirus capsid protein C |
195 |
PF01003
|
Flavivirus DEAD domain |
196 |
PF07652
|
Flavivirus glycoprotein, central and dimerisation domains |
197 |
PF00869
|
Flavivirus glycoprotein, immunoglobulin-like domain |
198 |
PF02832
|
Flavivirus envelope glycoprotein M |
199 |
PF01004
|
Flavivirus non-structural Protein NS1 |
200 |
PF00948
|
Flavivirus non-structural protein NS2A |
201 |
PF01005
|
Flavivirus non-structural protein NS2B |
202 |
PF01002
|
Flavivirus non-structural protein NS4A |
203 |
PF01350
|
Flavivirus non-structural protein NS4B |
204 |
PF01349
|
Flavivirus RNA-directed RNA polymerase |
205 |
PF00972
|
Flavivirus polyprotein propeptide |
206 |
PF01570
|
Flavodoxin |
207 |
PF00258
|
Flavodoxin-like fold |
208 |
PF02525
|
Flavodoxin domain |
209 |
PF12641
|
Flavodoxin |
210 |
PF12682
|
Flavodoxin domain |
211 |
PF01687
|
Flavoprotein |
212 |
PF02441
|
Flagellar protein (FlbD) |
213 |
PF06289
|
Flagellar protein FlbT |
214 |
PF07378
|
Flagellar regulatory protein FleQ |
215 |
PF08358
|
Flagellar hook capping protein - N-terminal region |
216 |
PF03963
|
FlgD Ig-like domain |
217 |
PF13860
|
FlgD Tudor-like domain |
218 |
PF13861
|
Flagellar L-ring protein |
219 |
PF02107
|
Flagellar P-ring protein |
220 |
PF04316
|
FlgN protein |
221 |
PF05130
|
Flagellar basal body rod FlgEFG protein C-terminal |
222 |
PF06429
|
Flagella basal body rod protein |
223 |
PF00460
|
Flagellar hook-length control protein FliK |
224 |
PF09479
|
Flagellar transcriptional activator (FlhC) |
225 |
PF05280
|
Flagellar transcriptional activator (FlhD) |
226 |
PF05247
|
Flagellar protein FlhE |
227 |
PF06366
|
Flagellin N-methylase |
228 |
PF03692
|
Flagellin protein |
229 |
PF12445
|
Flagellin structural protein |
230 |
PF12613
|
Flagellar hook-associated protein 2 C-terminus |
231 |
PF07195
|
Flagellar hook-associated protein 2 C-terminus |
232 |
PF02465
|
Flagellar hook-basal body complex protein FliE |
233 |
PF02049
|
FliG C-terminal domain |
234 |
PF01706
|
Flagellar assembly protein FliH |
235 |
PF02108
|
Flagellar FliJ protein |
236 |
PF02050
|
Flagellar basal body-associated protein FliL |
237 |
PF10306
|
Flagellar motor switch protein FliM |
238 |
PF02154
|
Flagellar biosynthesis protein, FliO |
239 |
PF04347
|
FliP family |
240 |
PF00813
|
Flagellar protein FliS |
241 |
PF02561
|
Flagellar protein FliT |
242 |
PF05400
|
FliW protein |
243 |
PF10768
|
Flo11 domain |
244 |
PF10182
|
Flocculin repeat |
245 |
PF00624
|
Flocculin type 3 repeat |
246 |
PF13928
|
Floricaula / Leafy protein |
247 |
PF05202
|
Flp/Fap pilin component |
248 |
PF00604
|
FlxA-like protein |
249 |
PF14282
|
FLYWCH zinc finger domain |
250 |
PF03069
|
FmdE, Molybdenum formylmethanofuran dehydrogenase operon |
251 |
PF02663
|
FMN-binding domain |
252 |
PF04299
|
FMN-dependent dehydrogenase |
253 |
PF03358
|
Flavin-binding monooxygenase-like |
254 |
PF07091
|
Fibronectin type I domain |
255 |
PF00039
|
Fibronectin type II domain |
256 |
PF00040
|
Fibronectin type III domain |
257 |
PF00041
|
Fibronectin type III-like domain |
258 |
PF14310
|
Fibronectin type III-like domain |
259 |
PF13287
|
Fn3 associated |
260 |
PF05725
|
FNIP Repeat |
261 |
PF02986
|
Fibronectin binding repeat |
262 |
PF03274
|
Foamy virus BEL 1/2 protein |
263 |
PF03408
|
Foamy virus envelope protein |
264 |
PF03623
|
Focal adhesion targeting region |
265 |
PF11817
|
Foie gras liver health family 1 |
266 |
PF03024
|
Folate receptor family |
267 |
PF09289
|
Follistatin/Osteonectin-like EGF domain |
268 |
PF09398
|
FOP N terminal dimerisation domain |
269 |
PF00250
|
Fork head domain |
270 |
PF08430
|
Forkhead N-terminal region |
271 |
PF09163
|
Formate dehydrogenase N, transmembrane |
272 |
PF02911
|
Formyl transferase, C-terminal domain |
273 |
PF00551
|
Formyl transferase |
274 |
PF01226
|
Formate/nitrite transporter |
275 |
PF06963
|
Ferroportin1 (FPN1) |
276 |
PF10621
|
F420H2 dehydrogenase subunit FpoO |
277 |
PF08445
|
FR47-like protein |
278 |
PF09725
|
Folate-sensitive fragile site protein Fra10Ac1 |
279 |
PF10277
|
Frag1/DRAM/Sfk1 family |
280 |
PF01491
|
Frataxin-like domain |
281 |
PF08867
|
FRG domain |
282 |
PF06229
|
FRG1-like family |
283 |
PF07899
|
Frigida-like protein |
284 |
PF02434
|
Fringe-like |
285 |
PF01534
|
Frizzled/Smoothened family membrane region |
286 |
PF09421
|
Frequency clock protein |
287 |
PF03881
|
Fructosamine kinase |
288 |
PF10479
|
Fragile site-associated protein C-terminus |
289 |
PF02971
|
Formiminotransferase domain |
290 |
PF04961
|
Formiminotransferase-cyclodeaminase |
291 |
PF07837
|
Formiminotransferase domain, N-terminal subdomain |
292 |
PF01827
|
FTH domain |
293 |
PF01268
|
Formate--tetrahydrofolate ligase |
294 |
PF12934
|
FTO C-terminal domain |
295 |
PF12933
|
FTO catalytic domain |
296 |
PF07504
|
Fungalysin/Thermolysin Propeptide Motif |
297 |
PF01913
|
Formylmethanofuran-tetrahydromethanopterin formyltransferase |
298 |
PF02741
|
FTR, proximal lobe |
299 |
PF06480
|
FtsH Extracellular |
300 |
PF01728
|
FtsJ-like methyltransferase |
301 |
PF09397
|
Ftsk gamma domain |
302 |
PF01580
|
FtsK/SpoIIIE family |
303 |
PF02687
|
FtsX-like permease family |
304 |
PF12327
|
FtsZ family, C-terminal domain |
305 |
PF03867
|
Fushi tarazu (FTZ), N-terminal region |
306 |
PF10415
|
Fumarase C C-terminus |
307 |
PF02300
|
Fumarate reductase subunit C |
308 |
PF02313
|
Fumarate reductase subunit D |
309 |
PF03630
|
Fumble |
310 |
PF05681
|
Fumarate hydratase (Fumerase) |
311 |
PF05683
|
Fumarase C-terminus |
312 |
PF04930
|
FUN14 family |
313 |
PF07938
|
Fungal fucose-specific lectin |
314 |
PF04082
|
Fungal specific transcription factor domain |
315 |
PF11951
|
Fungal specific transcription factor domain |
316 |
PF05933
|
Fungal ATP synthase protein 8 (A6L) |
317 |
PF01475
|
Ferric uptake regulator family |
318 |
PF00757
|
Furin-like cysteine rich region |
319 |
PF04632
|
Fusaric acid resistance protein family |
320 |
PF12805
|
FUSC-like inner membrane protein yccS |
321 |
PF13515
|
Fusaric acid resistance protein-like |
322 |
PF00523
|
Fusion glycoprotein F0 |
323 |
PF09259
|
Fungal immunomodulatory protein Fve |
324 |
PF12235
|
Fragile X-related 1 protein C terminal |
325 |
PF04186
|
FxsA cytoplasmic membrane protein |
326 |
PF05965
|
F/Y rich C-terminus |
327 |
PF05964
|
F/Y-rich N-terminus |
328 |
PF07078
|
Forty-two-three protein |
329 |
PF01363
|
FYVE zinc finger |
330 |
PF01392
|
Fz domain |
331 |
PF08919
|
F-actin binding |
332 |
PF01115
|
F-actin capping protein, beta subunit |
333 |
PF01116
|
Fructose-bisphosphate aldolase class-II |
334 |
PF00274
|
Fructose-bisphosphate aldolase class-I |
335 |
PF02056
|
Family 4 glycosyl hydrolase |
336 |
PF11975
|
Family 4 glycosyl hydrolase C-terminal domain |
337 |
PF07335
|
Fungal chitosanase of glycosyl hydrolase group 75 |
338 |
PF06831
|
Formamidopyrimidine-DNA glycosylase H2TH domain |
339 |
PF12196
|
FHA Ki67 binding domain of hNIFK |
340 |
PF07450
|
Formate hydrogenlyase maturation protein HycH |
341 |
PF01185
|
Fungal hydrophobin |
342 |
PF06766
|
Fungal hydrophobin |
343 |
PF12628
|
Falstatin, cysteine peptidase inhibitor |
344 |
PF10634
|
Fe2+ transport protein |
345 |
PF05849
|
Fibroin light chain (L-fibroin) |
346 |
PF13691
|
Family description |
347 |
PF12248
|
Farnesoic acid 0-methyl transferase |
348 |
PF08842
|
Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 |
349 |
PF04202
|
Foot protein 3 |
350 |
PF08030
|
Ferric reductase NAD binding domain |
351 |
PF13454
|
FAD-NAD(P)-binding |
352 |
PF08537
|
Fungal Nap binding protein NBP1 |
353 |
PF07472
|
Fucose-binding lectin II (PA-IIL) |
354 |
PF05408
|
Foot-and-mouth virus L-proteinase |
355 |
PF02128
|
Fungalysin metallopeptidase (M36) |
356 |
PF08015
|
Fungal mating-type pheromone |
357 |
PF05137
|
Fimbrial assembly protein (PilN) |
358 |
PF09604
|
F subunit of K+-transporting ATPase (Potass_KdpF) |
359 |
PF08605
|
Fungal Rad9-like Rad53-binding |
360 |
PF09457
|
FIP domain |
361 |
PF05732
|
Firmicute plasmid replication protein (RepL) |
362 |
PF03937
|
Flavinator of succinate dehydrogenase |
363 |
PF13096
|
Family description |
364 |
PF08644
|
FACT complex subunit (SPT16/CDC68) |
365 |
PF11966
|
Fibronectin-binding repeat |
366 |
PF02116
|
Fungal pheromone mating factor STE2 GPCR |
367 |
PF02910
|
Fumarate reductase flavoprotein C-term |
368 |
PF02657
|
Fe-S metabolism associated domain |
369 |
PF08549
|
Fungal domain of unknown function (DUF1750) |
370 |
PF11130
|
F pilus assembly Type-IV secretion system for plasmid transfer |
371 |
PF12615
|
F sex factor protein N terminal |
372 |
PF13728
|
F plasmid transfer operon protein |
373 |
PF13729
|
F plasmid transfer operon, TraF, protein |
374 |
PF06495
|
Fruit fly transformer protein |
375 |
PF06609
|
Fungal trichothecene efflux pump (TRI12) |
376 |
PF08302
|
Fungal tRNA ligase phosphodiesterase domain |
377 |
PF09288
|
Fungal ubiquitin-associated domain |
378 |
PF13538
|
Family description |
379 |
PF13517
|
Family description |
380 |
PF07317
|
Flagellar regulator YcgR |
381 |
PF12945
|
Flagellar protein YcgR |
382 |
PF08345
|
Flagellar M-ring protein C-terminal |
383 |
PF00172
|
Fungal Zn(2)-Cys(6) binuclear cluster domain |