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3PFDB+ - Browse PFam Families in 3PFDB+ starting with "S"
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No. Link to 3pfdb+ Pfam Description
1 PF00106 short chain dehydrogenase
2 PF04786 ssDNA binding protein
3 PF03482 sic protein
4 PF00747 ssDNA binding protein
5 PF04521 ssRNA positive strand viral 18kD cysteine rich protein
6 PF10777 sigma70 family sigma factor YlaC
7 PF12251 snRNA-activating protein of 50kDa MW C terminal
8 PF03491 Serotonin (5-HT) neurotransmitter transporter, N-terminus
9 PF02117 Serpentine type 7TM GPCR chemoreceptor Sra
10 PF10292 Serpentine type 7TM GPCR receptor class ab chemoreceptor
11 PF02175 Serpentine type 7TM GPCR chemoreceptor Srb
12 PF10316 Serpentine type 7TM GPCR chemoreceptor Srbc
13 PF10317 Serpentine type 7TM GPCR chemoreceptor Srd
14 PF10318 Serpentine type 7TM GPCR chemoreceptor Srh
15 PF10327 Serpentine type 7TM GPCR chemoreceptor Sri
16 PF10319 Serpentine type 7TM GPCR chemoreceptor Srj
17 PF10320 Serpentine type 7TM GPCR chemoreceptor Srsx
18 PF10321 Serpentine type 7TM GPCR chemoreceptor Srt
19 PF10322 Serpentine type 7TM GPCR chemoreceptor Sru
20 PF10323 Serpentine type 7TM GPCR chemoreceptor Srv
21 PF10324 Serpentine type 7TM GPCR chemoreceptor Srw
22 PF10328 Serpentine type 7TM GPCR chemoreceptor Srx
23 PF10325 Serpentine type 7TM GPCR chemoreceptor Srz
24 PF10326 Serpentine type 7TM GPCR chemoreceptor Str
25 PF04439 Streptomycin adenylyltransferase
26 PF05221 S-adenosyl-L-homocysteine hydrolase
27 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
28 PF08132 S-adenosyl-l-methionine decarboxylase leader peptide
29 PF02675 S-adenosylmethionine decarboxylase
30 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase)
31 PF05931 Staphylococcal AgrD protein
32 PF03752 Short repeats of unknown function
33 PF10369 Small subunit of acetolactate synthase
34 PF06369 Sea anemone cytotoxic protein
35 PF10796 Sigma-S stabilisation anti-adaptor protein
36 PF08025 Spider antimicrobial peptide
37 PF08102 Scorpion antimicrobial peptide
38 PF04996 Succinylarginine dihydrolase
39 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family
40 PF14397 Sugar-transfer associated ATP-grasp
41 PF09759 Spinocerebellar ataxia type 10 protein domain
42 PF06677 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
43 PF04700 Structural glycoprotein p40/gp41 conserved region
44 PF01103 Surface antigen
45 PF01145 SPFH domain / Band 7 family
46 PF13421 SPFH domain-Band 7 family
47 PF04940 Sensors of blue-light using FAD
48 PF07441 SigmaK-factor processing regulatory protein BofA
49 PF12820 Serine-rich domain associated with BRCT
50 PF00686 Starch binding domain
51 PF12876 Sugar-binding cellulase-like
52 PF11526 Subunit of cleavage factor IA Pcf11
53 PF13541 Subunit ChlI of Mg-chelatase
54 PF08764 Staphylococcus aureus coagulase
55 PF07552 Spore Coat Protein X and V domain
56 PF02248 Small coat protein
57 PF11546 Staphylococcal complement inhibitor SCIN
58 PF11007 Spore coat associated protein JA (CotJA)
59 PF12815 Spt5 C-terminal nonapeptide repeat binding Spt4
60 PF11500 Spindle-body formation-associated protein
61 PF10414 Sirohaem synthase dimerisation region
62 PF07876 Stress responsive A/B Barrel Domain
63 PF08287 Spc19
64 PF05652 Scavenger mRNA decapping enzyme (DcpS) N-terminal
65 PF11969 Scavenger mRNA decapping enzyme C-term binding
66 PF05384 Sensor protein DegS
67 PF10069 Sensory domain found in DIguanylate Cyclases & Two-component systems
68 PF05462 Slime mold cyclic AMP receptor
69 PF04977 Septum formation initiator
70 PF14144 Seed dormancy control
71 PF12316 Segment polarity protein dishevelled (Dsh) C terminal
72 PF07039 SGF29 tudor-like domain
73 PF10031 Small integral membrane protein (DUF2273)
74 PF03729 Short repeat of unknown function (DUF308)
75 PF03777 Small secreted domain (DUF320)
76 PF12406 Surface protein
77 PF12419 SNF2 Helicase protein
78 PF12548 Sulfatase protein
79 PF13593 SBF-like CPA transporter family (DUF4137)
80 PF05689 Salmonella repeat of unknown function (DUF823)
81 PF05688 Salmonella repeat of unknown function (DUF824)
82 PF05895 Siphovirus protein of unknown function (DUF859)
83 PF06106 Staphylococcus protein of unknown function (DUF950)
84 PF06124 Staphylococcal protein of unknown function (DUF960)
85 PF06131 Schizosaccharomyces pombe repeat of unknown function (DUF963)
86 PF07663 Sorbitol phosphotransferase enzyme II C-terminus
87 PF03612 Sorbitol phosphotransferase enzyme II N-terminus
88 PF06160 Septation ring formation regulator, EzrA
89 PF08021 Siderophore-interacting FAD-binding domain
90 PF03959 Serine hydrolase (FSH1)
91 PF03276 Spumavirus gag protein
92 PF10646 Sporulation and spore germination
93 PF10676 Spore germination protein gerPA/gerPF
94 PF10737 Spore germination protein GerPC
95 PF08518 Spa2 homology domain (SHD) of GIT
96 PF03616 Sodium/glutamate symporter
97 PF08323 Starch synthase catalytic domain
98 PF10342 Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family
99 PF02895 Signal transducing histidine kinase, homodimeric domain
100 PF11408 Sgs1 RecQ helicase
101 PF00103 Somatotropin hormone family
102 PF13694 Sec63/Sec62 complex-interacting family
103 PF02650 Sporulation Regulator WhiA C terminal domain
104 PF12282 Signal transduction histidine kinase
105 PF00048 Small cytokines (intecrine/chemokine), interleukin-8 like
106 PF14373 Superinfection immunity protein
107 PF12559 Serine endopeptidase inhibitors
108 PF10466 Saccharopepsin inhibitor I34
109 PF13734 Spi protease inhibitor
110 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC)
111 PF02060 Slow voltage-gated potassium channel
112 PF10685 Stress-induced bacterial acidophilic repeat motif
113 PF13543 SAM like domain present in kinase suppressor RAS 1
114 PF00477 Small hydrophilic plant seed protein
115 PF03583 Secretory lipase
116 PF08557 Sphingolipid Delta4-desaturase (DES)
117 PF12103 Surface lipoprotein of Spirochaetales order
118 PF03640 Secreted repeat of unknown function
119 PF12701 Scd6-like Sm domain
120 PF02664 S-Ribosylhomocysteinase (LuxS)
121 PF10564 Sialic-acid binding micronemal adhesive repeat
122 PF10156 Subunit 17 of Mediator complex
123 PF11221 Subunit 21 of Mediator complex
124 PF06179 Surfeit locus protein 5 subunit 22 of Mediator complex
125 PF05669 SOH1
126 PF12692 S-adenosyl-L-methionine methyltransferase
127 PF04672 S-adenosyl methyltransferase
128 PF05430 S-adenosyl-L-methionine-dependent methyltransferase
129 PF03492 SAM dependent carboxyl methyltransferase
130 PF10672 S-adenosylmethionine-dependent methyltransferase
131 PF09936 SAM-dependent RNA methyltransferase
132 PF12929 Stretch-activated Ca2+-permeable channel component
133 PF03775 Septum formation inhibitor MinC, C-terminal domain
134 PF05209 Septum formation inhibitor MinC, N-terminal domain
135 PF03776 Septum formation topological specificity factor MinE
136 PF03083 Sugar efflux transporter for intercellular exchange
137 PF13447 Seven times multi-haem cytochrome CxxCH
138 PF00893 Small Multidrug Resistance protein
139 PF11978 Shoulder domain
140 PF01235 Sodium:alanine symporter family
141 PF01699 Sodium/calcium exchanger protein
142 PF00999 Sodium/hydrogen exchanger family
143 PF00287 Sodium / potassium ATPase beta chain
144 PF00939 Sodium:sulfate symporter transmembrane region
145 PF06512 Sodium ion transport-associated
146 PF08628 Sorting nexin C terminal
147 PF08712 Scaffold protein Nfu/NifU N terminal
148 PF12830 Sister chromatid cohesion C-terminus
149 PF13945 Splicing factor, salt tolerance regulator
150 PF13562 Sugar nucleotidyl transferase
151 PF04069 Substrate binding domain of ABC-type glycine betaine transport system
152 PF04258 Signal peptide peptidase
153 PF01252 Signal peptidase (SPase) II
154 PF05416 Southampton virus-type processing peptidase
155 PF05543 Staphopain peptidase C47
156 PF02031 Streptomyces extracellular neutral proteinase (M7) family
157 PF00450 Serine carboxypeptidase
158 PF10502 Signal peptidase, peptidase S26
159 PF05577 Serine carboxypeptidase S28
160 PF05580 SpoIVB peptidase S55
161 PF13611 Serine peptidase of plant viral polyprotein, P1
162 PF00082 Subtilase family
163 PF03419 Sporulation factor SpoIIGA
164 PF09251 Salmonella phage P22 tail-spike
165 PF02304 Scaffold protein B
166 PF07410 Streptococcus thermophilus bacteriophage Gp111 protein
167 PF11477 Sialyltransferase PMO188
168 PF10114 Sensory domain found in PocR
169 PF01518 Sigma NS protein
170 PF08188 Spermatozal protamine family
171 PF00841 Sperm histone P2
172 PF06991 Splicing factor, Prp19-binding domain
173 PF13765 SPRY-associated domain
174 PF06958 S-type Pyocin
175 PF09566 SacI restriction endonuclease
176 PF09569 ScaI restriction endonuclease
177 PF09570 SinI restriction endonuclease
178 PF05635 S23 ribosomal protein
179 PF03297 S25 ribosomal protein
180 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein
181 PF11757 Suppressor of RNA silencing P21-like
182 PF02773 S-adenosylmethionine synthetase, C-terminal domain
183 PF02772 S-adenosylmethionine synthetase, central domain
184 PF00438 S-adenosylmethionine synthetase, N-terminal domain
185 PF05756 S-antigen protein
186 PF00575 S1 RNA binding domain
187 PF14444 S1-like
188 PF02265 S1/P1 Nuclease
189 PF13509 S1 domain
190 PF01479 S4 domain
191 PF07422 Sexual stage antigen s48/45 domain
192 PF13275 S4 domain
193 PF05116 Sucrose-6F-phosphate phosphohydrolase
194 PF08472 Sucrose-6-phosphate phosphohydrolase C-terminal
195 PF00277 Serum amyloid A protein
196 PF04382 SAB domain
197 PF03399 SAC3/GANP/Nin1/mts3/eIF-3 p25 family
198 PF03435 Saccharopine dehydrogenase
199 PF07738 Sad1 / UNC-like C-terminal
200 PF08666 SAF domain
201 PF09460 Saf-pilin pilus formation protein
202 PF13144 SAF-like
203 PF04092 SRS domain
204 PF01259 SAICAR synthetase
205 PF12115 Salivary protein of 15kDa inhibits CD4+ T cell activation
206 PF05924 SAMP Motif
207 PF00536 SAM domain (Sterile alpha motif)
208 PF07647 SAM domain (Sterile alpha motif)
209 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase
210 PF02198 Sterile alpha motif (SAM)/Pointed domain
211 PF01342 SAND domain
212 PF09133 SANTA (SANT Associated)
213 PF02037 SAP domain
214 PF06487 Sin3 associated polypeptide p18 (SAP18)
215 PF13867 Sin3 binding region of histone deacetylase complex subunit SAP30
216 PF02199 Saposin A-type domain
217 PF05184 Saposin-like type B, region 1
218 PF03489 Saposin-like type B, region 2
219 PF07277 SapC
220 PF04499 SIT4 phosphatase-associated protein
221 PF03058 Sar8.2 family
222 PF11409 Smad anchor for receptor activation (SARA)
223 PF04790 Sarcoglycan complex subunit protein
224 PF05510 Sarcoglycan alpha/epsilon
225 PF05366 Sarcolipin
226 PF12383 Severe acute respiratory syndrome coronavirus 3b protein
227 PF09399 SARS lipid binding protein
228 PF08779 SARS coronavirus X4 like
229 PF03343 SART-1 family
230 PF04000 Sas10/Utp3/C1D family
231 PF09368 Sas10 C-terminal domain
232 PF00269 Small, acid-soluble spore proteins, alpha/beta type
233 PF04259 Small, acid-soluble spore protein, gamma-type
234 PF06426 Serine acetyltransferase, N-terminal
235 PF11561 Single strand annealing-weakened 1
236 PF01172 Shwachman-Bodian-Diamond syndrome (SBDS) protein
237 PF09377 SBDS protein C-terminal domain
238 PF01758 Sodium Bile acid symporter family
239 PF05992 SbmA/BacA-like family
240 PF03110 SBP domain
241 PF08313 SCA7, zinc-binding domain
242 PF04144 SCAMP family
243 PF02023 SCAN domain
244 PF02404 Stem cell factor
245 PF02667 Short chain fatty acid transporter
246 PF04486 SchA/CurD like domain
247 PF10148 Schwannomin-interacting protein 1
248 PF05463 Sclerostin (SOST)
249 PF02630 SCO1/SenC
250 PF05483 Synaptonemal complex protein 1 (SCP-1)
251 PF14428 SCP1.201-like deaminase
252 PF02036 SCP-2 sterol transfer family
253 PF13530 Sterol carrier protein domain
254 PF02616 ScpA/B protein
255 PF05229 Spore Coat Protein U domain
256 PF03803 Scramblase
257 PF02982 Scytalone dehydratase
258 PF08970 Sporulation inhibitor A
259 PF05285 SDA1
260 PF00375 Sodium:dicarboxylate symporter family
261 PF03313 Serine dehydratase alpha chain
262 PF03315 Serine dehydratase beta chain
263 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit
264 PF01972 Serine dehydrogenase proteinase
265 PF06977 SdiA-regulated
266 PF13630 SdpI/YhfL protein family
267 PF12278 Sex determination protein N terminal
268 PF08598 Sds3-like
269 PF08491 Squalene epoxidase
270 PF12390 Selenocysteine synthase N terminal
271 PF01390 SEA domain
272 PF07322 Seadornavirus Vp10
273 PF07407 Seadornavirus VP6 protein
274 PF07387 Seadornavirus VP7
275 PF02810 SEC-C motif
276 PF00995 Sec1 family
277 PF12931 Sec23-binding domain of Sec16
278 PF03908 Sec20
279 PF08033 Sec23/Sec24 beta-sandwich domain
280 PF04815 Sec23/Sec24 helical domain
281 PF04811 Sec23/Sec24 trunk domain
282 PF04136 Sec34-like family
283 PF08314 Secretory pathway protein Sec39
284 PF03911 Sec61beta family
285 PF02889 Sec63 Brl domain
286 PF01369 Sec7 domain
287 PF04048 Sec8 exocyst complex component specific domain
288 PF07517 SecA DEAD-like domain
289 PF01043 SecA preprotein cross-linking domain
290 PF07516 SecA Wing and Scaffold domain
291 PF13721 SecD export protein N-terminal TM region
292 PF00584 SecE/Sec61-gamma subunits of protein translocation complex
293 PF05364 Salmonella type III secretion SopE effector N-terminus
294 PF06558 Secretion monitor precursor protein (SecM)
295 PF07655 Secretin N-terminal domain
296 PF04856 Securin sister-chromatid separation inhibitor
297 PF00344 SecY translocase
298 PF07549 SecD/SecF GG Motif
299 PF04628 Sedlin, N-terminal conserved region
300 PF06443 SEF14-like adhesin
301 PF08357 SEFIR domain
302 PF08238 Sel1 repeat
303 PF11524 Selenium binding protein
304 PF06936 Selenoprotein S (SelS)
305 PF04593 Selenoprotein P, C terminal region
306 PF04592 Selenoprotein P, N terminal region
307 PF01641 SelR domain
308 PF01403 Sema domain
309 PF05474 Semenogelin
310 PF01118 Semialdehyde dehydrogenase, NAD binding domain
311 PF02774 Semialdehyde dehydrogenase, dimerisation domain
312 PF09631 Sen15 protein
313 PF12726 SEN1 N terminal
314 PF06911 Senescence-associated protein
315 PF04520 Senescence regulator
316 PF13755 Sensor N-terminal transmembrane domain
317 PF08059 SEP domain
318 PF08806 Sep15/SelM redox domain
319 PF06622 SepQ protein
320 PF00735 Septin
321 PF13845 Septum formation
322 PF06066 SepZ
323 PF03925 SeqA protein
324 PF05482 Serendipity locus alpha protein (SRY-A)
325 PF04360 Serglycin
326 PF03348 Serine incorporator (Serinc)
327 PF08824 Serine rich protein interaction domain
328 PF00079 Serpin (serine protease inhibitor)
329 PF05540 Serpulina hyodysenteriae variable surface protein
330 PF06031 SERTA motif
331 PF00273 Serum albumin family
332 PF02403 Seryl-tRNA synthetase N-terminal domain
333 PF06821 Serine hydrolase
334 PF00856 SET domain
335 PF08138 Sex peptide (SP) family
336 PF06705 SF-assemblin/beta giardin
337 PF12108 Splicing factor SF3a60 binding domain
338 PF08920 Splicing factor 3B subunit 1
339 PF07189 Splicing factor 3B subunit 10 (SF3b10)
340 PF08457 Sfi1 spindle body protein
341 PF10638 Spindle body associated protein C-terminus
342 PF03749 Sugar fermentation stimulation protein
343 PF08209 Sgf11 (transcriptional regulation protein)
344 PF08450 SMP-30/Gluconolaconase/LRE-like region
345 PF12793 Sugar transport-related sRNA regulator N-term
346 PF05002 SGS domain
347 PF07093 SGT1 protein
348 PF00017 SH2 domain
349 PF04908 SH3-binding, glutamic acid-rich protein
350 PF05276 SH3 domain-binding protein 5 (SH3BP5)
351 PF00018 SH3 domain
352 PF12913 SH3 domain of the SH3b1 type
353 PF12914 SH3 domain of SH3b2 type
354 PF13457 SH3-like domain
355 PF11601 Shal-type voltage-gated potassium channels
356 PF03983 SLA1 homology domain 1, SHD1
357 PF05546 She9 / Mdm33 family
358 PF06128 Shigella flexneri OspC protein
359 PF01488 Shikimate / quinate 5-dehydrogenase
360 PF08501 Shikimate dehydrogenase substrate binding domain
361 PF07004 Sperm-tail PG-rich repeat
362 PF01549 ShK domain-like
363 PF00464 Serine hydroxymethyltransferase
364 PF10516 SHNi-TPR
365 PF09851 Short C-terminal domain
366 PF03579 Small hydrophobic protein
367 PF04925 SHQ1 protein
368 PF02491 SHS2 domain inserted in FTSA
369 PF03876 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
370 PF07557 Shugoshin C terminus
371 PF07558 Shugoshin N-terminal coiled-coil region
372 PF09032 Siah interacting protein, N terminal
373 PF02973 Sialidase, N-terminal domain
374 PF12135 Sialidase enzyme penultimate C terminal domain
375 PF12887 SICA extracellular alpha domain
376 PF12878 SICA extracellular beta domain
377 PF12879 SICA C-terminal inner membrane domain
378 PF09119 SicP binding
379 PF11778 Septation initiation
380 PF14163 Superinfection exclusion protein B
381 PF06767 Sif protein
382 PF00158 Sigma-54 interaction domain
383 PF00309 Sigma-54 factor, Activator interacting domain (AID)
384 PF04963 Sigma-54 factor, core binding domain
385 PF04552 Sigma-54, DNA binding domain
386 PF04546 Sigma-70, non-essential region
387 PF03979 Sigma-70 factor, region 1.1
388 PF00140 Sigma-70 factor, region 1.2
389 PF04542 Sigma-70 region 2
390 PF04539 Sigma-70 region 3
391 PF04545 Sigma-70, region 4
392 PF08281 Sigma-70, region 4
393 PF02454 Sigma 1s protein
394 PF13791 Sigma factor regulator C-terminal
395 PF13800 Sigma factor regulator N-terminal
396 PF03842 Silicon transporter
397 PF06621 Single-minded protein C-terminus
398 PF05422 Stress-activated map kinase interacting protein 1 (SIN1)
399 PF08295 Sin3 family co-repressor
400 PF03145 Seven in absentia protein family
401 PF04801 Sin-like protein conserved region
402 PF04954 Siderophore-interacting protein
403 PF04938 Survival motor neuron (SMN) interacting protein 1 (SIP1)
404 PF09052 Salmonella invasion protein A
405 PF05565 Siphovirus Gp157
406 PF02146 Sir2 family
407 PF13289 SIR2-like domain
408 PF01206 SirA-like protein
409 PF01380 SIS domain
410 PF13580 SIS domain
411 PF01202 Shikimate kinase
412 PF02731 SKIP/SNW domain
413 PF02437 SKI/SNO/DAC family
414 PF09076 Streptomyces killer toxin-like
415 PF01466 Skp1 family, dimerisation domain
416 PF03931 Skp1 family, tetramerisation domain
417 PF06214 Signaling lymphocytic activation molecule (SLAM) protein
418 PF05889 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)
419 PF10531 SLBB domain
420 PF07620 SLEI
421 PF00395 S-layer homology domain
422 PF09111 SLIDE
423 PF07333 S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP)
424 PF02258 Shiga-like toxin beta subunit
425 PF09494 Slx4 endonuclease
426 PF04102 SlyX
427 PF14438 SM domain found in Ataxin-2
428 PF09057 Second Mitochondria-derived Activator of Caspases
429 PF06470 SMC proteins Flexible Hinge Domain
430 PF03467 Smg-4/UPF3 family
431 PF09346 SMI1 / KNR4 family (SUKH-1)
432 PF06003 Survival motor neuron protein (SMN)
433 PF12510 Smoothelin cytoskeleton protein
434 PF04927 Seed maturation protein
435 PF04355 SmpA / OmlA family
436 PF01668 SmpB protein
437 PF01713 Smr domain
438 PF00835 SNAP-25 family
439 PF11035 Small nuclear RNA activating complex subunit 2-like
440 PF09808 Small nuclear RNA activating complex (SNAPc), subunit SNAP43
441 PF05739 SNARE domain
442 PF09335 SNARE associated Golgi protein
443 PF00565 Staphylococcal nuclease homologue
444 PF00209 Sodium:neurotransmitter symporter family
445 PF00176 SNF2 family N-terminal domain
446 PF04855 SNF5 / SMARCB1 / INI1
447 PF03357 Snf7
448 PF09051 Stannin cytoplasmic
449 PF09050 Stannin unstructured linker
450 PF09049 Stannin transmembrane
451 PF01174 SNO glutamine amidotransferase family
452 PF07366 SnoaL-like polyketide cyclase
453 PF12680 SnoaL-like domain
454 PF13474 SnoaL-like domain
455 PF13577 SnoaL-like domain
456 PF07192 SNURF/RPN4 protein
457 PF11538 Snurportin1
458 PF12610 Suppressor of cytokine signalling
459 PF07525 SOCS box
460 PF04158 Sof1-like domain
461 PF01033 Somatomedin B domain
462 PF03002 Somatostatin/Cortistatin family
463 PF13981 SopA-like central domain
464 PF13979 SopA-like catalytic domain
465 PF11047 Salmonella outer protein D
466 PF07487 SopE GEF domain
467 PF07682 Sulphur oxygenase reductase
468 PF02208 Sorbin homologous domain
469 PF09666 Sororin protein
470 PF04203 Sortase family
471 PF03700 Sorting nexin, N-terminal domain
472 PF01680 SOR/SNZ family
473 PF04832 SOUL heme-binding protein
474 PF04267 Sarcosine oxidase, delta subunit family
475 PF06525 Sulfocyanin (SoxE)
476 PF04268 Sarcosine oxidase, gamma subunit family
477 PF12336 SOX transcription factor
478 PF13501 Sulfur oxidation protein SoxY
479 PF08770 Sulphur oxidation protein SoxZ
480 PF12067 Sox C-terminal transactivation domain
481 PF12444 Sox developmental protein N terminal
482 PF03172 Sp100 domain
483 PF03014 Structural protein 2
484 PF08616 Stabilisation of polarity axis
485 PF14028 SpaB C-terminal domain
486 PF02090 Salmonella surface presentation of antigen gene type M protein
487 PF02510 Surface presentation of antigens protein
488 PF07458 Sperm protein associated with nucleus, mapped to X chromosome
489 PF10591 Secreted protein acidic and rich in cysteine Ca binding region
490 PF07780 Spb1 C-terminal domain
491 PF04573 Signal peptidase subunit
492 PF08286 Spc24 subunit of Ndc80
493 PF11544 Spindle pole body component Spc42p
494 PF08317 Spc7 kinetochore protein
495 PF04130 Spc97 / Spc98 family
496 PF10136 Site-specific recombinase
497 PF00435 Spectrin repeat
498 PF01564 Spermine/spermidine synthase
499 PF08250 Sperm-activating peptides
500 PF05324 Sperm antigen HE2
501 PF12138 Spherulation-specific family 4
502 PF09408 Spike receptor binding domain
503 PF02513 Spin/Ssty Family
504 PF05215 Spiralin
505 PF08769 Sporulation initiation factor Spo0A C terminal
506 PF07070 SpoOM protein
507 PF03533 SPO11 homologue
508 PF05032 Spo12 family
509 PF03907 Spo7-like protein
510 PF01052 Surface presentation of antigens (SPOA)
511 PF07744 SPOC domain
512 PF08486 Stage II sporulation protein
513 PF07228 Stage II sporulation protein E (SpoIIE)
514 PF06686 Stage III sporulation protein AC/AD protein family
515 PF12685 SpoIIIAH-like protein
516 PF12116 Stage III sporulation protein D
517 PF07454 Stage II sporulation protein P (SpoIIP)
518 PF06468 Spondin_N
519 PF09388 Spo0E like sporulation regulatory protein
520 PF05036 Sporulation related domain
521 PF10612 Spore coat protein Z
522 PF14153 Spore coat protein CotO
523 PF05504 Spore germination B3/ GerAC like, C-terminal
524 PF09671 Spore coat protein (Spore_GerQ)
525 PF09548 Stage III sporulation protein AB (spore_III_AB)
526 PF09546 Stage III sporulation protein AE (spore_III_AE)
527 PF09581 Stage III sporulation protein AF (Spore_III_AF)
528 PF09551 Stage II sporulation protein R (spore_II_R)
529 PF09547 Stage IV sporulation protein A (spore_IV_A)
530 PF03845 Spore germination protein
531 PF09575 Small spore protein J (Spore_SspJ)
532 PF09578 Spore cortex protein YabQ (Spore_YabQ)
533 PF14147 Sporulation protein YhaL
534 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
535 PF09577 Sporulation protein YpjB (SpoYpjB)
536 PF09579 Sporulation protein YtfJ (Spore_YtfJ)
537 PF14034 Sporulation protein YtrH
538 PF09560 Sporulation protein YunB (Spo_YunB)
539 PF05642 Sporozoite P67 surface antigen
540 PF12164 Stage V sporulation protein AA
541 PF00588 SpoU rRNA Methylase family
542 PF12105 SpoU, rRNA methylase, C-terminal
543 PF08183 Stage V sporulation protein family
544 PF03862 SpoVA protein
545 PF13782 Stage V sporulation protein AB
546 PF07451 Stage V sporulation protein AD (SpoVAD)
547 PF14097 Stage V sporulation protein AE1
548 PF04026 SpoVG
549 PF14069 Stage VI sporulation protein F
550 PF04293 SpoVR like protein
551 PF04232 Stage V sporulation protein S (SpoVS)
552 PF07448 Secreted phosphoprotein 24 (Spp-24)
553 PF12118 SprA-related family
554 PF05210 Sprouty protein (Spry)
555 PF10263 SprT-like family
556 PF00622 SPRY domain
557 PF08243 SPT2 chromatin protein
558 PF12090 Spt20 family
559 PF06093 Spt4/RpoE2 zinc finger
560 PF11942 Spt5 transcription elongation factor, acidic N-terminal
561 PF03539 Spumavirus aspartic protease (A9)
562 PF03534 Salmonella virulence plasmid 65kDa B protein
563 PF05563 Salmonella plasmid virulence protein SpvD
564 PF03779 SPW repeat
565 PF03105 SPX domain
566 PF08999 Surfactant protein C, N terminal propeptide
567 PF00494 Squalene/phytoene synthase
568 PF00299 Squash family serine protease inhibitor
569 PF07304 Steroid receptor RNA activator (SRA1)
570 PF08832 Steroid receptor coactivator
571 PF00530 Scavenger receptor cysteine-rich domain
572 PF00319 SRF-type transcription factor (DNA-binding and dimerisation domain)
573 PF02118 Srg family chemoreceptor
574 PF08236 SRI (Set2 Rpb1 interacting) domain
575 PF04086 Signal recognition particle, alpha subunit, N-terminal
576 PF02290 Signal recognition particle 14kD protein
577 PF01922 SRP19 protein
578 PF00660 Seripauperin and TIP1 family
579 PF05022 SRP40, C-terminal domain
580 PF00448 SRP54-type protein, GTPase domain
581 PF02881 SRP54-type protein, helical bundle domain
582 PF08492 SRP72 RNA-binding domain
583 PF05486 Signal recognition particle 9 kDa protein (SRP9)
584 PF09439 Signal recognition particle receptor beta subunit
585 PF02978 Signal peptide binding domain
586 PF07709 Seven Residue Repeat
587 PF07985 SRR1
588 PF09201 SRX
589 PF00436 Single-strand binding protein family
590 PF10141 Single-strand DNA-specific exonuclease, C terminal domain
591 PF04503 Single-stranded DNA binding protein, SSDP
592 PF07179 SseB protein
593 PF04888 Secretion system effector C (SseC) like family
594 PF00474 Sodium:solute symporter family
595 PF04686 Streptomyces sporulation and cell division protein, SsgA
596 PF00720 Subtilisin inhibitor-like
597 PF04056 Ssl1-like
598 PF06933 Special lobe-specific silk protein SSP160
599 PF04386 Stringent starvation protein B
600 PF08141 Small acid-soluble spore protein H family
601 PF14098 Small, acid-soluble spore protein I
602 PF08176 Small acid-soluble spore protein K family
603 PF08177 Small acid-soluble spore protein N family
604 PF08175 Small acid-soluble spore protein O family
605 PF08179 Small acid-soluble spore protein P family
606 PF03531 Structure-specific recognition protein (SSRP1)
607 PF04722 Ssu72-like protein
608 PF09514 SSXRD motif
609 PF05030 SSXT protein (N-terminal region)
610 PF04184 ST7 protein
611 PF08514 STAG domain
612 PF03298 Stanniocalcin family
613 PF09022 Staphostatin A
614 PF09023 Staphostatin B
615 PF04022 Staphylocoagulase repeat
616 PF02821 Staphylokinase/Streptokinase family
617 PF05480 Staphylococcus haemolytic protein
618 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain
619 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain
620 PF01852 START domain
621 PF01740 STAS domain
622 PF13466 STAS domain
623 PF12162 STAT1 TAZ2 binding domain
624 PF12188 Signal transducer and activator of transcription 2 C terminal
625 PF03875 Statherin
626 PF00836 Stathmin family
627 PF01017 STAT protein, all-alpha domain
628 PF02864 STAT protein, DNA binding domain
629 PF02865 STAT protein, protein interaction domain
630 PF12638 Staygreen protein
631 PF06406 StbA protein
632 PF12898 Stc1 domain
633 PF02200 STE like transcription factor
634 PF11610 Scaffold protein Ste5-Fus5 binding region
635 PF09235 Ste50p, sterile alpha motif
636 PF12349 Sterol-sensing domain of SREBP cleavage-activation
637 PF08498 Sterol methyltransferase C-terminal
638 PF04885 Stigma-specific protein, Stig1
639 PF13756 Stimulus-sensing domain
640 PF09061 Stirrup
641 PF10494 Serine-threonine protein kinase 19
642 PF09598 Stm1
643 PF07660 Secretin and TonB N terminus short domain
644 PF12016 Stonin 2
645 PF05217 STOP protein
646 PF06638 Strabismus protein
647 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family
648 PF04270 Streptococcal histidine triad protein
649 PF06696 Streptococcal surface antigen repeat
650 PF01657 Salt stress response/antifungal
651 PF08232 Striatin family
652 PF03088 Strictosidine synthase
653 PF13607 Succinyl-CoA ligase like flavodoxin domain
654 PF00862 Sucrose synthase
655 PF06999 Sucrase/ferredoxin-like
656 PF05843 Suppressor of forked protein (Suf)
657 PF05076 Suppressor of fused protein (SUFU)
658 PF12470 Suppressor of Fused Gli/Ci N terminal binding domain
659 PF00083 Sugar (and other) transporter
660 PF06800 Sugar transport protein
661 PF14433 SUKH-3 immunity protein
662 PF14435 SUKH-4 immunity protein
663 PF08257 Sulfakinin family
664 PF00884 Sulfatase
665 PF00916 Sulfate transporter family
666 PF13792 Sulfate transporter N-terminal domain with GLY motif
667 PF05584 Sulfolobus plasmid regulatory protein
668 PF00685 Sulfotransferase domain
669 PF03567 Sulfotransferase family
670 PF13469 Sulfotransferase family
671 PF12193 Sulfolobus virus coat protein C terminal
672 PF04143 Sulphur transport
673 PF09037 Stf0 sulphotransferase
674 PF06687 SUR7/PalI family
675 PF09312 SurA N-terminal domain
676 PF13623 SurA N-terminal domain
677 PF13624 SurA N-terminal domain
678 PF01975 Survival protein SurE
679 PF02104 SURF1 family
680 PF05477 Surfeit locus protein 2 (SURF2)
681 PF02077 SURF4 family
682 PF04935 Surfeit locus protein 6
683 PF01617 Surface antigen
684 PF11054 Sporozoite TA4 surface antigen
685 PF07244 Surface antigen variable number repeat
686 PF07712 Stress up-regulated Nod 19
687 PF01805 Surp module
688 PF07980 SusD family
689 PF12741 Susd and RagB outer membrane lipoprotein
690 PF12771 Starch-binding associating with outer membrane
691 PF14322 Starch-binding associating with outer membrane
692 PF14292 SusE outer membrane protein
693 PF00084 Sushi domain (SCR repeat)
694 PF12752 SUZ domain
695 PF12901 SUZ-C motif
696 PF05326 Seminal vesicle autoantigen (SVA)
697 PF08622 Svf1-like
698 PF12113 SVM protein signal sequence
699 PF10578 Seminal vesicle protein repeat
700 PF07061 Swi5
701 PF02201 SWIB/MDM2 domain
702 PF04434 SWIM zinc finger
703 PF04433 SWIRM domain
704 PF04099 Sybindin-like family
705 PF07348 Syd protein (SUKH-2)
706 PF08231 SYF2 splicing factor
707 PF02383 SacI homology domain
708 PF12295 Symplekin tight junction protein C terminal
709 PF05835 Synaphin protein
710 PF02078 Synapsin, N-terminal domain
711 PF02750 Synapsin, ATP binding domain
712 PF10581 Synapsin N-terminal
713 PF00957 Synaptobrevin
714 PF01034 Syndecan domain
715 PF00804 Syntaxin
716 PF10496 SNARE-complex protein Syntaxin-18 N-terminus
717 PF09177 Syntaxin 6, N-terminal
718 PF01387 Synuclein
719 PF01023 S-100/ICaBP type calcium binding domain
720 PF05124 S-layer like family, C-terminal region
721 PF05123 S-layer like family, N-terminal region
722 PF00954 S-locus glycoprotein family
723 PF00902 Sec-independent protein translocase protein (TatC)
724 PF01925 Sulfite exporter TauE/SafE
725 PF03898 Satellite tobacco necrosis virus coat protein
726 PF00087 Snake toxin
727 PF07473 Spasmodic peptide gm9a
728 PF07906 ShET2 enterotoxin, N-terminal region
729 PF00451 Scorpion short toxin, BmKK2
730 PF08091 Spider insecticidal peptide
731 PF08099 Scorpion calcine family
732 PF08115 SFI toxin family
733 PF00537 Scorpion toxin-like domain
734 PF08119 Scorpion acidic alpha-KTx toxin family
735 PF08396 Spider toxin omega agatoxin/Tx1 family
736 PF05294 Scorpion short toxin
737 PF02819 Spider toxin
738 PF12477 Sex factor F TraW protein N terminal
739 PF01978 Sugar-specific transcriptional regulator TrmB
740 PF07240 Stress-inducible humoral factor Turandot
741 PF12352 Snare region anchored in the vesicle membrane C-terminus
742 PF12189 Single-strand DNA-binding protein
743 PF03538 Salmonella virulence plasmid 28.1kDa A protein
744 PF03536 Salmonella virulence-associated 28kDa protein
745 PF10298 Sporulation Regulator WhiA N terminal
746 PF09109 Switch protein XOL-1, GHMP-like
747 PF09108 Switch protein XOL-1, N-terminal
748 PF12127 SigmaW regulon antibacterial
749 PF01514 Secretory protein of YscJ/FliF family
750 PF13866 SAP30 zinc-finger
751 PF04810 Sec23/Sec24 zinc finger