3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00698

Details:

PFam ID : PF00698

PFam Domain Description : Acyl transferase domain

Number of Sequence in 50% Dataset : 887

Number of Sequence in Full Dataset : 5870

Average sequence length: 291.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00698	E3K960_PUCGT_484_757	87.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00698	A2VH86_MYCTU_554_602	99.9

Sequence based PCA Plot of the family - PF00698 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=88 Length=29
Motif2 Start=74 Length=11
Motif3 Start=139 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay