3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11415 Details: PFam ID : PF11415 PFam Domain Description : Antifungal peptide termicin Number of Sequence in 50% Dataset : 2 Number of Sequence in Full Dataset : 36 Average sequence length: 33.9 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF11415B0WDA2_CULQU_343_398No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF11415Q5SDI4_9NEOP_27_59100 Sequence based PCA Plot of the family - PF11415 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=1 Length=11Motif2 Start=17 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF11415
PFam Domain Description : Antifungal peptide termicin
Number of Sequence in 50% Dataset : 2
Number of Sequence in Full Dataset : 36
Average sequence length: 33.9
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER