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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF11415
Details:

PFam ID : PF11415

PFam Domain Description : Antifungal peptide termicin

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 36

Average sequence length: 33.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF11415B0WDA2_CULQU_343_398No suitable BRS could be identified
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF11415Q5SDI4_9NEOP_27_59100
Sequence based PCA Plot of the family - PF11415 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=11
Motif2 Start=17 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay