3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02822

Details:

PFam ID : PF02822

PFam Domain Description : Antistasin family

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 167

Average sequence length: 26.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02822	O44131_CAEEL_1550_1578	66.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02822	E4YB55_OIKDI_310_328	90.9

Sequence based PCA Plot of the family - PF02822 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=10 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay