3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14269

Details:

PFam ID : PF14269

PFam Domain Description : Arylsulfotransferase (ASST)

Number of Sequence in 50% Dataset : 84

Number of Sequence in Full Dataset : 189

Average sequence length: 264.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14269	E2LCX1_MONPE_3_89	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14269	B2VQN2_PYRTR_38_353	100

Sequence based PCA Plot of the family - PF14269 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=155 Length=8
Motif2 Start=7 Length=8
Motif3 Start=287 Length=8
Motif4 Start=211 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay