3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02807

Details:

PFam ID : PF02807

PFam Domain Description : ATP:guanido phosphotransferase, N-terminal domain

Number of Sequence in 50% Dataset : 15

Number of Sequence in Full Dataset : 304

Average sequence length: 73.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02807	E7MMZ2_9FIRM_374_493	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02807	E2BRG5_9HYME_896_994	100

Sequence based PCA Plot of the family - PF02807 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=29 Length=8
Motif2 Start=20 Length=8
Motif3 Start=11 Length=8
Motif4 Start=63 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay