3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13651

Details:

PFam ID : PF13651

PFam Domain Description : Adenine-specific methyltransferase EcoRI

Number of Sequence in 50% Dataset : 38

Number of Sequence in Full Dataset : 87

Average sequence length: 229.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13651	B3EQR1_CHLPB_9_31	13.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13651	E1QBW3_MYCPB_74_315	100

Sequence based PCA Plot of the family - PF13651 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=11
Motif2 Start=10 Length=8
Motif3 Start=37 Length=8
Motif4 Start=130 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay