3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02752

Details:

PFam ID : PF02752

PFam Domain Description : Arrestin (or S-antigen), C-terminal domain

Number of Sequence in 50% Dataset : 264

Number of Sequence in Full Dataset : 752

Average sequence length: 151.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02752	E1ZAB9_9CHLO_52_83	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02752	A9V110_MONBE_177_374	90.2

Sequence based PCA Plot of the family - PF02752 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=23 Length=8
Motif2 Start=169 Length=8
Motif3 Start=14 Length=8
Motif4 Start=189 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay