3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08444

Details:

PFam ID : PF08444

PFam Domain Description : Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region

Number of Sequence in 50% Dataset : 8

Number of Sequence in Full Dataset : 31

Average sequence length: 83.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08444	B4DU33_HUMAN_185_273	85.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08444	B4DU33_HUMAN_185_273	100

Sequence based PCA Plot of the family - PF08444 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=6 Length=17
Motif2 Start=25 Length=8
Motif3 Start=79 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay