3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13673

Details:

PFam ID : PF13673

PFam Domain Description : Acetyltransferase (GNAT) domain

Number of Sequence in 50% Dataset : 1081

Number of Sequence in Full Dataset : 2596

Average sequence length: 117.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13673	D1RNH9_SEROD_190_264	94.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13673	E9Q3Q5_MOUSE_3_81	99.1

Sequence based PCA Plot of the family - PF13673 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=1 Length=8
Motif2 Start=30 Length=8
Motif3 Start=68 Length=8
Motif4 Start=102 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay