3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09830

Details:

PFam ID : PF09830

PFam Domain Description : ATP adenylyltransferase

Number of Sequence in 50% Dataset : 24

Number of Sequence in Full Dataset : 164

Average sequence length: 63.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09830	A1BIZ6_CHLPD_2_56	34.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09830	Q4P995_USTMA_295_369	100

Sequence based PCA Plot of the family - PF09830 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=7 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay