No. |
Link to 3pfdb+ |
Pfam Description |
1 |
PF03484
|
tRNA synthetase B5 domain |
2 |
PF04287
|
tRNA pseudouridine synthase C |
3 |
PF08704
|
tRNA methyltransferase complex GCD14 subunit |
4 |
PF06175
|
tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) |
5 |
PF13794
|
tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like |
6 |
PF01416
|
tRNA pseudouridine synthase |
7 |
PF12738
|
twin BRCT domain |
8 |
PF04446
|
tRNAHis guanylyltransferase |
9 |
PF06200
|
tify domain |
10 |
PF01994
|
tRNA ribose 2'-O-methyltransferase, aTrm56 |
11 |
PF00133
|
tRNA synthetases class I (I, L, M and V) |
12 |
PF00579
|
tRNA synthetases class I (W and Y) |
13 |
PF00749
|
tRNA synthetases class I (E and Q), catalytic domain |
14 |
PF03950
|
tRNA synthetases class I (E and Q), anti-codon binding domain |
15 |
PF00750
|
tRNA synthetases class I (R) |
16 |
PF01406
|
tRNA synthetases class I (C) catalytic domain |
17 |
PF01921
|
tRNA synthetases class I (K) |
18 |
PF09334
|
tRNA synthetases class I (M) |
19 |
PF00152
|
tRNA synthetases class II (D, K and N) |
20 |
PF00587
|
tRNA synthetase class II core domain (G, H, P, S and T) |
21 |
PF01411
|
tRNA synthetases class II (A) |
22 |
PF01409
|
tRNA synthetases class II core domain (F) |
23 |
PF12869
|
tRNA_anti-like |
24 |
PF01974
|
tRNA intron endonuclease, catalytic C-terminal domain |
25 |
PF02778
|
tRNA intron endonuclease, N-terminal domain |
26 |
PF12928
|
tRNA-splicing endonuclease subunit sen54 N-term |
27 |
PF08303
|
tRNA ligase kinase domain |
28 |
PF01746
|
tRNA (Guanine-1)-methyltransferase |
29 |
PF03054
|
tRNA methyl transferase |
30 |
PF13735
|
tRNA nucleotidyltransferase domain 2 putative |
31 |
PF09249
|
tRNA nucleotidyltransferase, second domain |
32 |
PF05958
|
tRNA (Uracil-5-)-methyltransferase |
33 |
PF09142
|
tRNA Pseudouridine synthase II, C terminal |
34 |
PF01142
|
tRNA pseudouridine synthase D (TruD) |
35 |
PF08521
|
Two-component sensor kinase N-terminal |
36 |
PF03061
|
Thioesterase superfamily |
37 |
PF13279
|
Thioesterase-like superfamily |
38 |
PF13622
|
Thioesterase-like superfamily |
39 |
PF09038
|
Tumour suppressor p53-binding protein-1 Tudor |
40 |
PF01490
|
Transmembrane amino acid transporter protein |
41 |
PF08386
|
TAP-like protein |
42 |
PF11657
|
Transcriptional activator TraM |
43 |
PF11498
|
Transcriptional activator LAG-3 |
44 |
PF08731
|
Transcription factor AFT |
45 |
PF10731
|
Thrombin inhibitor from mosquito |
46 |
PF08130
|
Type A lantibiotic family |
47 |
PF11527
|
The ARF-like 2 binding protein BART |
48 |
PF12226
|
Turkey astrovirus capsid protein |
49 |
PF13919
|
Transcriptional enhancer, Asx-hm domain |
50 |
PF14305
|
TupA-like ATPgrasp |
51 |
PF09794
|
Transport protein Avl9 |
52 |
PF12201
|
Theoretical model of a pro-apoptotic protein |
53 |
PF08381
|
Transcription factor regulating root and shoot growth via Pin3 |
54 |
PF13713
|
Transcription factor BRX N-terminal domain |
55 |
PF07975
|
TFIIH C1-like domain |
56 |
PF10511
|
Trappin protein transglutaminase binding domain |
57 |
PF11439
|
Type III secretion system filament chaperone CesA |
58 |
PF05932
|
Tir chaperone protein (CesT) family |
59 |
PF07824
|
Type III secretion chaperone domain |
60 |
PF12431
|
Transcriptional regulator |
61 |
PF06653
|
Tight junction protein, Claudin-like |
62 |
PF10383
|
Transcription-silencing protein Clr2 |
63 |
PF03471
|
Transporter associated domain |
64 |
PF00118
|
TCP-1/cpn60 chaperonin family |
65 |
PF10380
|
Transcription factor CRF1 |
66 |
PF07417
|
Transcriptional regulator Crl |
67 |
PF10614
|
Type VIII secretion system (T8SS), CsgF protein |
68 |
PF14304
|
Transcription termination and cleavage factor C-terminal |
69 |
PF10482
|
Tumour-suppressor protein CtIP N-terminal domain |
70 |
PF03638
|
Tesmin/TSO1-like CXC domain |
71 |
PF12378
|
Trypsin-sensitive surface-exposed protein |
72 |
PF08503
|
Tetrahydrodipicolinate succinyltransferase N-terminal |
73 |
PF04290
|
Tripartite ATP-independent periplasmic transporters, DctQ component |
74 |
PF01609
|
Transposase DDE domain |
75 |
PF13586
|
Transposase DDE domain |
76 |
PF13612
|
Transposase DDE domain |
77 |
PF13701
|
Transposase DDE domain group 1 |
78 |
PF13737
|
Transposase DDE domain |
79 |
PF13751
|
Transposase DDE domain |
80 |
PF13843
|
Transposase IS4 |
81 |
PF03050
|
Transposase IS66 family |
82 |
PF01610
|
Transposase |
83 |
PF01526
|
Tn3 transposase DDE domain |
84 |
PF01548
|
Transposase |
85 |
PF12041
|
Transcriptional regulator DELLA protein N terminal |
86 |
PF01487
|
Type I 3-dehydroquinase |
87 |
PF02281
|
Transposase Tn5 dimerisation domain |
88 |
PF11053
|
Terminase DNA packaging enzyme |
89 |
PF07680
|
TQO small subunit DoxA |
90 |
PF04173
|
TQO small subunit DoxD |
91 |
PF08781
|
Transcription factor DP |
92 |
PF02593
|
Thymidylate synthase |
93 |
PF09493
|
Tryptophan-rich protein (DUF2389) |
94 |
PF01060
|
Transthyretin-like family |
95 |
PF03537
|
TM1410 hypothetical-related protein |
96 |
PF11938
|
TLR4 regulator and MIR-interacting MSAP |
97 |
PF12077
|
Transmembrane protein of unknown function (DUF3556) |
98 |
PF12089
|
Transmembrane domain of unknown function (DUF3566) |
99 |
PF04473
|
Transglutaminase-like domain |
100 |
PF05598
|
Transposase domain (DUF772) |
101 |
PF12180
|
TSG101 and ALIX binding domain of CEP55 |
102 |
PF12008
|
Type I restriction and modification enzyme - subunit R C terminal |
103 |
PF08917
|
Transforming growth factor beta receptor 2 ectodomain |
104 |
PF11957
|
THO complex subunit 1 transcription elongation factor |
105 |
PF01176
|
Translation initiation factor 1A / IF-1 |
106 |
PF12807
|
Translation initiation factor eIF3 subunit 135 |
107 |
PF08597
|
Translation initiation factor eIF3 subunit |
108 |
PF12310
|
Transcription factor protein N terminal |
109 |
PF05129
|
Transcription elongation factor Elf1 like |
110 |
PF09124
|
T4 recombination endonuclease VII, dimerisation |
111 |
PF12241
|
Trans-2-enoyl-CoA reductase catalytic region |
112 |
PF10163
|
Transcription factor e(y)2 |
113 |
PF04148
|
Transmembrane adaptor Erv26 |
114 |
PF10374
|
Telomerase activating protein Est1 |
115 |
PF10341
|
Telomerase holoenzyme, Est3 subunit |
116 |
PF09721
|
Transmembrane exosortase (Exosortase_EpsH) |
117 |
PF12892
|
T surface-antigen of pili |
118 |
PF13955
|
Toxin Fst, type I toxin-antitoxin system |
119 |
PF02649
|
Type I GTP cyclohydrolase folE2 |
120 |
PF12550
|
Transcriptional activator of glycolytic enzymes |
121 |
PF07581
|
The GLUG motif |
122 |
PF03409
|
Transmembrane glycoprotein |
123 |
PF12604
|
Tail fiber protein gp37 C terminal |
124 |
PF01272
|
Transcription elongation factor, GreA/GreB, C-term |
125 |
PF03449
|
Transcription elongation factor, N-terminal |
126 |
PF12019
|
Type II transport protein GspH |
127 |
PF00693
|
Thymidine kinase from herpesvirus |
128 |
PF08465
|
Thymidine kinase from Herpesvirus C-terminal |
129 |
PF07569
|
TUP1-like enhancer of split |
130 |
PF02098
|
Tick histamine binding protein |
131 |
PF10115
|
Transcriptional activator HlyU |
132 |
PF09483
|
Type III secretion protein (HpaP) |
133 |
PF04313
|
Type I restriction enzyme R protein N terminus (HSDR_N) |
134 |
PF13588
|
Type I restriction enzyme R protein N terminus (HSDR_N) |
135 |
PF01527
|
Transposase |
136 |
PF01710
|
Transposase |
137 |
PF11427
|
Tc3 transposase |
138 |
PF01498
|
Transposase |
139 |
PF03221
|
Tc5 transposase DNA-binding domain |
140 |
PF11046
|
Transcriptional repressor of hyc and hyp operons |
141 |
PF10416
|
Transcription-initiator DNA-binding domain IBD |
142 |
PF13956
|
Toxin Ibs, type I toxin-antitoxin system |
143 |
PF11987
|
Translation-initiation factor 2 |
144 |
PF04760
|
Translation initiation factor IF-2, N-terminal region |
145 |
PF00707
|
Translation initiation factor IF-3, C-terminal domain |
146 |
PF05198
|
Translation initiation factor IF-3, N-terminal domain |
147 |
PF10430
|
Tie-2 Ig-like domain 1 |
148 |
PF11714
|
Thrombin inhibitor Madanin |
149 |
PF01348
|
Type II intron maturase |
150 |
PF00197
|
Trypsin and protease inhibitor |
151 |
PF09621
|
Type III secretion system regulator (LcrR) |
152 |
PF13940
|
Toxin Ldr, type I toxin-antitoxin system |
153 |
PF08254
|
Threonine leader peptide |
154 |
PF08255
|
Trp-operon Leader Peptide |
155 |
PF11488
|
Transcriptional regulatory protein LGE1 |
156 |
PF01298
|
Transferrin binding protein-like solute binding protein |
157 |
PF10158
|
Tumour suppressor protein |
158 |
PF02606
|
Tetraacyldisaccharide-1-P 4'-kinase |
159 |
PF06453
|
Type II heat-labile enterotoxin , B subunit (LT-IIB) |
160 |
PF13007
|
Transposase C of IS166 homeodomain |
161 |
PF04604
|
Type-A lantibiotic |
162 |
PF09726
|
Transmembrane protein |
163 |
PF10393
|
Trimeric coiled-coil oligomerisation domain of matrilin |
164 |
PF05301
|
Touch receptor neuron protein Mec-17 |
165 |
PF09748
|
Transcription factor subunit Med10 of Mediator complex |
166 |
PF09497
|
Transcription mediator complex subunit Med12 |
167 |
PF08612
|
TATA-binding related factor (TRF) of subunit 20 of Mediator complex |
168 |
PF08711
|
TFIIS helical bundle-like domain |
169 |
PF06236
|
Tyrosinase co-factor MelC1 |
170 |
PF09746
|
Tumour-associated protein |
171 |
PF01420
|
Type I restriction modification DNA specificity domain |
172 |
PF05977
|
Transmembrane secretion effector |
173 |
PF12829
|
Transcriptional regulation of mitochondrial recombination |
174 |
PF12246
|
Temperature dependent protein affecting M2 dsRNA replication |
175 |
PF12247
|
Temperature dependent protein affecting M2 dsRNA replication |
176 |
PF03164
|
Trafficking protein Mon1 |
177 |
PF09114
|
Transcription factor MotA, activation domain |
178 |
PF03820
|
Tricarboxylate carrier |
179 |
PF04208
|
Tetrahydromethanopterin S-methyltransferase, subunit A |
180 |
PF05440
|
Tetrahydromethanopterin S-methyltransferase subunit B |
181 |
PF04211
|
Tetrahydromethanopterin S-methyltransferase, subunit C |
182 |
PF04207
|
Tetrahydromethanopterin S-methyltransferase, subunit D |
183 |
PF04206
|
Tetrahydromethanopterin S-methyltransferase, subunit E |
184 |
PF09472
|
Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) |
185 |
PF04210
|
Tetrahydromethanopterin S-methyltransferase, subunit G |
186 |
PF02007
|
Tetrahydromethanopterin S-methyltransferase MtrH subunit |
187 |
PF06253
|
Trimethylamine methyltransferase (MTTB) |
188 |
PF09392
|
Type III secretion needle MxiH like |
189 |
PF11474
|
Telomerase reverse transcriptase TEN domain |
190 |
PF02357
|
Transcription termination factor nusG |
191 |
PF13544
|
Type IV pilin N-term methylation site GFxxxE |
192 |
PF08618
|
Transcription factor Opi1 |
193 |
PF04844
|
Transcriptional repressor, ovate |
194 |
PF11619
|
Transcription factor P53 - C terminal domain |
195 |
PF03551
|
Transcriptional regulator PadR-like family |
196 |
PF03309
|
Type III pantothenate kinase |
197 |
PF08601
|
Transcription factor PAP1 |
198 |
PF02380
|
T-antigen specific domain |
199 |
PF09770
|
Topoisomerase II-associated protein PAT1 |
200 |
PF02229
|
Transcriptional Coactivator p15 (PC4) |
201 |
PF09341
|
Transcription factor Pcc1 |
202 |
PF01478
|
Type IV leader peptidase family |
203 |
PF12384
|
Ty3 transposon peptidase |
204 |
PF05381
|
Tymovirus endopeptidase |
205 |
PF12381
|
Tungro spherical virus-type peptidase |
206 |
PF02073
|
Thermophilic metalloprotease (M29) |
207 |
PF01447
|
Thermolysin metallopeptidase, catalytic domain |
208 |
PF02868
|
Thermolysin metallopeptidase, alpha-helical domain |
209 |
PF11126
|
Transcriptional regulator DsbA |
210 |
PF06120
|
Tail length tape measure protein |
211 |
PF06841
|
T4-like virus tail tube protein gp19 |
212 |
PF06591
|
T4-like phage nuclear disruption protein (Ndd) |
213 |
PF01663
|
Type I phosphodiesterase / nucleotide pyrophosphatase |
214 |
PF14245
|
Type IV pilin PilA |
215 |
PF13675
|
Type IV pili methyl-accepting chemotaxis transducer N-term |
216 |
PF11356
|
Type IV pilus biogenesis |
217 |
PF13681
|
Type IV pilus assembly protein PilX C-term |
218 |
PF12703
|
Toxin of toxin-antitoxin type 1 system |
219 |
PF07715
|
TonB-dependent Receptor Plug Domain |
220 |
PF09480
|
Type III secretion system protein PrgH-EprH (PrgH) |
221 |
PF11773
|
Type II secretory pathway pseudopilin |
222 |
PF07494
|
Two component regulator propeller |
223 |
PF12606
|
Tumour necrosis factor receptor superfamily member 19 |
224 |
PF08048
|
Tap RepA1 leader peptide |
225 |
PF04851
|
Type III restriction enzyme, res subunit |
226 |
PF11407
|
Type II restriction enzyme MunI |
227 |
PF11487
|
Type II restriction enzyme SfiI |
228 |
PF09665
|
Type II restriction endonuclease (RE_Alw26IDE) |
229 |
PF09573
|
TaqI restriction endonuclease |
230 |
PF06116
|
Transcriptional activator RinB |
231 |
PF09293
|
T4 RNase H, C terminal |
232 |
PF12042
|
Tubuliform egg casing silk strands structural domain |
233 |
PF02082
|
Transcriptional regulator |
234 |
PF12767
|
Transcriptional regulator of RNA polII, SAGA, subunit |
235 |
PF12320
|
Type 5 capsule protein repressor C-terminal domain |
236 |
PF03839
|
Translocation protein Sec62 |
237 |
PF08693
|
Transmembrane alpha-helix domain |
238 |
PF01464
|
Transglycosylase SLT domain |
239 |
PF13406
|
Transglycosylase SLT domain |
240 |
PF11132
|
Transcriptional regulator protein (SplA) |
241 |
PF14171
|
Toxin SpoIISA, type II toxin-antitoxin system |
242 |
PF07084
|
Thyroid hormone-inducible hepatic protein Spot 14 |
243 |
PF10451
|
Telomere regulation protein Stn1 |
244 |
PF12659
|
Telomere capping C-terminal wHTH |
245 |
PF12191
|
Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain |
246 |
PF01300
|
Telomere recombination |
247 |
PF01253
|
Translation initiation factor SUI1 |
248 |
PF08845
|
Toxin SymE, type I toxin-antitoxin system |
249 |
PF00907
|
T-box |
250 |
PF00437
|
Type II/IV secretion system protein |
251 |
PF05157
|
Type II secretion system (T2SS), protein E, N-terminal domain |
252 |
PF00482
|
Type II secretion system (T2SS), protein F |
253 |
PF08334
|
Type II secretion system (T2SS), protein G |
254 |
PF02501
|
Type II secretion system (T2SS), protein I |
255 |
PF11612
|
Type II secretion system (T2SS), protein J |
256 |
PF03934
|
Type II secretion system (T2SS), protein K |
257 |
PF05134
|
Type II secretion system (T2SS), protein L |
258 |
PF04612
|
Type II secretion system (T2SS), protein M |
259 |
PF10741
|
Type II secretion system (T2SS), protein M subtype b |
260 |
PF01203
|
Type II secretion system (T2SS), protein N |
261 |
PF13327
|
Type III secretion system subunit |
262 |
PF07996
|
Type IV secretion system proteins |
263 |
PF02534
|
Type IV secretory system Conjugative DNA transfer |
264 |
PF12322
|
T4 bacteriophage base plate protein |
265 |
PF08994
|
T4 gene Gp59 loader of gp41 DNA helicase C-term |
266 |
PF08993
|
T4 gene Gp59 loader of gp41 DNA helicase |
267 |
PF11091
|
Tail-tube assembly protein |
268 |
PF10544
|
T5orf172 domain |
269 |
PF12790
|
Type VI secretion lipoprotein |
270 |
PF11494
|
Ta0938 |
271 |
PF11513
|
Thermoplasma acidophilum protein TA0956 |
272 |
PF05010
|
Transforming acidic coiled-coil-containing protein (TACC) |
273 |
PF02202
|
Tachykinin family |
274 |
PF09305
|
TACI, cysteine-rich domain |
275 |
PF07811
|
TadE-like protein |
276 |
PF05596
|
Taeniidae antigen |
277 |
PF02969
|
TATA box binding protein associated factor (TAF) |
278 |
PF05236
|
Transcription initiation factor TFIID component TAF4 family |
279 |
PF10406
|
Transcription factor TFIID complex subunit 8 C-term |
280 |
PF12020
|
TAFA family |
281 |
PF10610
|
Thin aggregative fimbriae synthesis protein |
282 |
PF04658
|
TAFII55 protein conserved region |
283 |
PF12561
|
ToxR activated gene A lipoprotein |
284 |
PF08013
|
Tagatose 6 phosphate kinase |
285 |
PF04822
|
Takusan |
286 |
PF09141
|
Talin, middle domain |
287 |
PF11640
|
Telomere-length maintenance and DNA damage repair |
288 |
PF07519
|
Tannase and feruloyl esterase |
289 |
PF09162
|
Tap, RNA-binding |
290 |
PF07265
|
Tapetum specific protein TAP35/TAP44 |
291 |
PF04177
|
TAP42-like family |
292 |
PF03943
|
TAP C-terminal domain |
293 |
PF09281
|
Taq polymerase, exonuclease |
294 |
PF12950
|
TaqI-like C-terminal specificity domain |
295 |
PF02203
|
Tar ligand binding domain homologue |
296 |
PF07708
|
Tash protein PEST motif |
297 |
PF00539
|
Transactivating regulatory protein (Tat) |
298 |
PF01026
|
TatD related DNase |
299 |
PF03430
|
Trans-activating transcriptional regulator |
300 |
PF10518
|
TAT (twin-arginine translocation) pathway signal sequence |
301 |
PF02668
|
Taurine catabolism dioxygenase TauD, TfdA family |
302 |
PF01361
|
Tautomerase enzyme |
303 |
PF00683
|
TB domain |
304 |
PF03134
|
TB2/DP1, HVA22 family |
305 |
PF02970
|
Tubulin binding cofactor A |
306 |
PF07986
|
Tubulin binding cofactor C |
307 |
PF12845
|
TBD domain |
308 |
PF06331
|
Transcription factor TFIIH complex subunit Tfb5 |
309 |
PF00352
|
Transcription factor TFIID (or TATA-binding protein, TBP) |
310 |
PF09247
|
TATA box-binding protein binding |
311 |
PF07106
|
Tat binding protein 1(TBP-1)-interacting protein (TBPIP) |
312 |
PF03558
|
TBSV core protein P21/P22 |
313 |
PF12598
|
T-box transcription factor |
314 |
PF12919
|
TcdA/TcdB catalytic glycosyltransferase domain |
315 |
PF12920
|
TcdA/TcdB pore forming domain |
316 |
PF12918
|
TcdB toxin N-terminal helical domain |
317 |
PF12104
|
T cell CD4 receptor C terminal region |
318 |
PF04910
|
Transcriptional repressor TCF25 |
319 |
PF01840
|
TCL1/MTCP1 family |
320 |
PF10452
|
TORC1 subunit TCO89 |
321 |
PF03634
|
TCP family transcription factor |
322 |
PF07202
|
T-complex protein 10 C-terminus |
323 |
PF05794
|
T-complex protein 11 |
324 |
PF05946
|
Toxin-coregulated pilus subunit TcpA |
325 |
PF12648
|
TcpE family |
326 |
PF10671
|
Toxin co-regulated pilus biosynthesis protein Q |
327 |
PF11628
|
T-cell surface glycoprotein CD3 zeta chain |
328 |
PF01970
|
Tripartite tricarboxylate transporter TctA family |
329 |
PF07331
|
Tripartite tricarboxylate transporter TctB family |
330 |
PF03401
|
Tripartite tricarboxylate transporter family receptor |
331 |
PF03645
|
Tctex-1 family |
332 |
PF00838
|
Translationally controlled tumour protein |
333 |
PF01285
|
TEA/ATTS domain family |
334 |
PF07404
|
Telomere-binding protein beta subunit (TEBP beta) |
335 |
PF09300
|
Tectiviridae, minor capsid |
336 |
PF03848
|
Tellurite resistance protein TehB |
337 |
PF03148
|
Tektin family |
338 |
PF05816
|
Toxic anion resistance protein (TelA) |
339 |
PF09470
|
Telethonin protein |
340 |
PF10138
|
Tellurium resistance protein |
341 |
PF12009
|
Telomerase ribonucleoprotein complex - RNA binding domain |
342 |
PF10193
|
Telomere length regulation protein |
343 |
PF13019
|
Telomere stability and silencing |
344 |
PF13297
|
Telomere stability C-terminal |
345 |
PF02765
|
Telomeric single stranded DNA binding POT1/CDC13 |
346 |
PF12658
|
Telomere capping |
347 |
PF03070
|
TENA/THI-4/PQQC family |
348 |
PF05733
|
Tenuivirus/Phlebovirus nucleocapsid protein |
349 |
PF04876
|
Tenuivirus major non-capsid protein |
350 |
PF05310
|
Tenuivirus movement protein |
351 |
PF03300
|
Tenuivirus non-structural protein NS4 |
352 |
PF06656
|
Tenuivirus PVC2 protein |
353 |
PF06484
|
Teneurin Intracellular Region |
354 |
PF05386
|
TEP1 N-terminal domain |
355 |
PF05099
|
Tellurite resistance protein TerB |
356 |
PF03592
|
Terminase small subunit |
357 |
PF03237
|
Terminase-like family |
358 |
PF01397
|
Terpene synthase, N-terminal domain |
359 |
PF03936
|
Terpene synthase family, metal binding domain |
360 |
PF08034
|
Trematode eggshell synthesis protein |
361 |
PF08076
|
Tetracycline resistance determinant leader peptide |
362 |
PF11401
|
Tetrabrachion |
363 |
PF00335
|
Tetraspanin family |
364 |
PF02909
|
Tetracyclin repressor, C-terminal all-alpha domain |
365 |
PF14278
|
Transcriptional regulator C-terminal region |
366 |
PF08050
|
Tetracycline resistance leader peptide |
367 |
PF09371
|
Tex-like protein N-terminal domain |
368 |
PF03849
|
Transcription factor Tfb2 |
369 |
PF03850
|
Transcription factor Tfb4 |
370 |
PF12612
|
Tubulin folding cofactor D C terminal |
371 |
PF03153
|
Transcription factor IIA, alpha/beta subunit |
372 |
PF02751
|
Transcription initiation factor IIA, gamma subunit |
373 |
PF02268
|
Transcription initiation factor IIA, gamma subunit, helical domain |
374 |
PF00382
|
Transcription factor TFIIB repeat |
375 |
PF02269
|
Transcription initiation factor IID, 18kD subunit |
376 |
PF02291
|
Transcription initiation factor IID, 31kD subunit |
377 |
PF03847
|
Transcription initiation factor TFIID subunit A |
378 |
PF03540
|
Transcription initiation factor TFIID 23-30kDa subunit |
379 |
PF02002
|
TFIIE alpha subunit |
380 |
PF02186
|
TFIIE beta subunit core domain |
381 |
PF05793
|
Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) |
382 |
PF02270
|
Transcription initiation factor IIF, beta subunit |
383 |
PF08567
|
TFIIH p62 subunit, N-terminal domain |
384 |
PF12657
|
Transcription factor IIIC subunit delta N-term |
385 |
PF10419
|
TFIIIC subunit |
386 |
PF01096
|
Transcription factor S-II (TFIIS) |
387 |
PF07500
|
Transcription factor S-II (TFIIS), central domain |
388 |
PF04994
|
TfoX C-terminal domain |
389 |
PF04993
|
TfoX N-terminal domain |
390 |
PF04253
|
Transferrin receptor-like dimerisation domain |
391 |
PF07812
|
TfuA-like protein |
392 |
PF03299
|
Transcription factor AP-2 |
393 |
PF08271
|
TFIIB zinc-binding |
394 |
PF00688
|
TGF-beta propeptide |
395 |
PF00019
|
Transforming growth factor beta like domain |
396 |
PF08515
|
Transforming growth factor beta type I GS-motif |
397 |
PF11476
|
Toxoplasma gondii micronemal protein 1 TgMIC1 |
398 |
PF02824
|
TGS domain |
399 |
PF04858
|
TH1 protein |
400 |
PF05485
|
THAP domain |
401 |
PF00314
|
Thaumatin family |
402 |
PF05317
|
Thermopsin |
403 |
PF00763
|
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain |
404 |
PF02882
|
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain |
405 |
PF14413
|
Thg1 C terminal domain |
406 |
PF01946
|
Thi4 family |
407 |
PF09515
|
Thiamine transporter protein (Thia_YuaJ) |
408 |
PF01964
|
ThiC family |
409 |
PF13667
|
ThiC-associated domain |
410 |
PF00899
|
ThiF family |
411 |
PF05690
|
Thiazole biosynthesis protein ThiG |
412 |
PF02568
|
Thiamine biosynthesis protein (ThiI) |
413 |
PF00975
|
Thioesterase domain |
414 |
PF02803
|
Thiolase, C-terminal domain |
415 |
PF00108
|
Thiolase, N-terminal domain |
416 |
PF01289
|
Thiol-activated cytolysin |
417 |
PF00085
|
Thioredoxin |
418 |
PF13098
|
Thioredoxin-like domain |
419 |
PF13192
|
Thioredoxin domain |
420 |
PF13462
|
Thioredoxin |
421 |
PF13743
|
Thioredoxin |
422 |
PF13848
|
Thioredoxin-like domain |
423 |
PF13899
|
Thioredoxin-like |
424 |
PF13905
|
Thioredoxin-like |
425 |
PF02597
|
ThiS family |
426 |
PF14453
|
ThiS-like ubiquitin |
427 |
PF09512
|
Thiamine-precursor transporter protein (ThiW) |
428 |
PF11262
|
Transcription factor/nuclear export subunit protein 2 |
429 |
PF11732
|
Transcription- and export-related complex subunit |
430 |
PF05615
|
Tho complex subunit 7 |
431 |
PF09432
|
Tho complex subunit THP2 |
432 |
PF09396
|
Thrombin light chain |
433 |
PF04163
|
Tht1-like nuclear fusion protein |
434 |
PF06283
|
Trehalose utilisation |
435 |
PF02926
|
THUMP domain |
436 |
PF02511
|
Thymidylate synthase complementing protein |
437 |
PF11264
|
Thylakoid formation protein |
438 |
PF02223
|
Thymidylate kinase |
439 |
PF00303
|
Thymidylate synthase |
440 |
PF08198
|
Thymopoietin protein |
441 |
PF01290
|
Thymosin beta-4 family |
442 |
PF00086
|
Thyroglobulin type-1 repeat |
443 |
PF09685
|
Tic20-like protein |
444 |
PF04278
|
Tic22-like family |
445 |
PF01826
|
Trypsin Inhibitor like cysteine rich domain |
446 |
PF12714
|
TILa domain |
447 |
PF09179
|
TilS substrate binding domain |
448 |
PF11734
|
TilS substrate C-terminal domain |
449 |
PF00121
|
Triosephosphate isomerase |
450 |
PF09370
|
TIM-barrel signal transduction protein |
451 |
PF02466
|
Tim17/Tim22/Tim23/Pmp24 family |
452 |
PF08294
|
TIM21 |
453 |
PF04280
|
Tim44-like domain |
454 |
PF04821
|
Timeless protein |
455 |
PF05029
|
Timeless protein C terminal region |
456 |
PF00965
|
Tissue inhibitor of metalloproteinase |
457 |
PF08623
|
TATA-binding protein interacting (TIP20) |
458 |
PF04176
|
TIP41-like family |
459 |
PF06068
|
TIP49 C-terminus |
460 |
PF07739
|
TipAS antibiotic-recognition domain |
461 |
PF12457
|
Tuftelin interacting protein N terminal |
462 |
PF01582
|
TIR domain |
463 |
PF13676
|
TIR domain |
464 |
PF07489
|
Translocated intimin receptor (Tir) C-terminus |
465 |
PF03549
|
Translocated intimin receptor (Tir) intimin-binding domain |
466 |
PF07490
|
Translocated intimin receptor (Tir) N-terminus |
467 |
PF04553
|
Tis11B like protein, N terminus |
468 |
PF13939
|
Toxin TisB, type I toxin-antitoxin system |
469 |
PF01108
|
Tissue factor |
470 |
PF09042
|
Titin Z |
471 |
PF00265
|
Thymidine kinase |
472 |
PF03219
|
TLC ATP/ADP transporter |
473 |
PF07534
|
TLD |
474 |
PF05154
|
TM2 domain |
475 |
PF10149
|
Transmembrane protein 231 |
476 |
PF09072
|
Translation machinery associated TMA7 |
477 |
PF07810
|
TMC domain |
478 |
PF09064
|
Thrombomodulin like fifth domain, EGF-like |
479 |
PF09772
|
Transmembrane protein 26 |
480 |
PF03647
|
Transmembrane proteins 14C |
481 |
PF10269
|
Transmembrane Fragile-X-F protein |
482 |
PF09771
|
Transmembrane protein 188 |
483 |
PF09788
|
Transmembrane protein 55A |
484 |
PF05434
|
TMEM9 |
485 |
PF12329
|
TATA element modulatory factor 1 DNA binding |
486 |
PF12325
|
TATA element modulatory factor 1 TATA binding |
487 |
PF06234
|
Toluene-4-monooxygenase system protein B (TmoB) |
488 |
PF05017
|
TMP repeat |
489 |
PF02581
|
Thiamine monophosphate synthase/TENI |
490 |
PF07851
|
TMPIT-like protein |
491 |
PF08721
|
TnsA endonuclease C terminal |
492 |
PF08722
|
TnsA endonuclease N terminal |
493 |
PF11426
|
Tn7 transposition regulator TnsC |
494 |
PF08053
|
Tryptophanese operon leader peptide |
495 |
PF00229
|
TNF(Tumour Necrosis Factor) family |
496 |
PF00020
|
TNFR/NGFR cysteine-rich region |
497 |
PF06527
|
TniQ |
498 |
PF14198
|
Transposon-encoded protein TnpV |
499 |
PF14202
|
Transposon-encoded protein TnpW |
500 |
PF12017
|
Transposase protein |
501 |
PF03459
|
TOBE domain |
502 |
PF08402
|
TOBE domain |
503 |
PF12857
|
TOBE-like domain |
504 |
PF05271
|
Tobravirus 2B protein |
505 |
PF14249
|
Tocopherol cyclase |
506 |
PF12549
|
Tyrosine hydroxylase N terminal |
507 |
PF06519
|
TolA C-terminal |
508 |
PF04052
|
TolB amino-terminal domain |
509 |
PF05494
|
Toluene tolerance, Ttg2 |
510 |
PF11801
|
Tom37 C-terminal domain |
511 |
PF08038
|
TOM7 family |
512 |
PF05318
|
Tombusvirus movement protein |
513 |
PF03220
|
Tombusvirus P19 core protein |
514 |
PF08500
|
Tombusvirus p33 |
515 |
PF13103
|
TonB C terminal |
516 |
PF00593
|
TonB dependent receptor |
517 |
PF09239
|
Topoisomerase VI B subunit, transducer |
518 |
PF08272
|
Topoisomerase I zinc-ribbon-like |
519 |
PF01751
|
Toprim domain |
520 |
PF13155
|
Toprim-like |
521 |
PF13362
|
Toprim domain |
522 |
PF13662
|
Toprim domain |
523 |
PF13368
|
Topoisomerase C-terminal repeat |
524 |
PF12886
|
Transducer of regulated CREB activity, C terminus |
525 |
PF12885
|
Transducer of regulated CREB activity middle domain |
526 |
PF12884
|
Transducer of regulated CREB activity, N terminus |
527 |
PF06309
|
Torsin |
528 |
PF01533
|
Tospovirus nucleocapsid protein |
529 |
PF05518
|
Totivirus coat protein |
530 |
PF09121
|
Tower |
531 |
PF14424
|
The BURPS668_1122 family of deaminases |
532 |
PF08120
|
Tamulustoxin family |
533 |
PF10530
|
Toxin with inhibitor cystine knot ICK or Knottin scaffold |
534 |
PF05980
|
Toxin 7 |
535 |
PF11663
|
Toxin with endonuclease activity YhaV |
536 |
PF13958
|
Toxin ToxN, type III toxin-antitoxin system |
537 |
PF04406
|
Type IIB DNA topoisomerase |
538 |
PF04201
|
Tumour protein D52 family |
539 |
PF04265
|
Thiamin pyrophosphokinase, vitamin B1 binding domain |
540 |
PF04263
|
Thiamin pyrophosphokinase, catalytic domain |
541 |
PF05724
|
Thiopurine S-methyltransferase (TPMT) |
542 |
PF12580
|
Tripeptidyl peptidase II |
543 |
PF12583
|
Tripeptidyl peptidase II N terminal |
544 |
PF12555
|
Thiamine pyrophosphokinase C terminal |
545 |
PF02775
|
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain |
546 |
PF00205
|
Thiamine pyrophosphate enzyme, central domain |
547 |
PF02776
|
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain |
548 |
PF00515
|
Tetratricopeptide repeat |
549 |
PF13374
|
Tetratricopeptide repeat |
550 |
PF13414
|
TPR repeat |
551 |
PF13424
|
Tetratricopeptide repeat |
552 |
PF13428
|
Tetratricopeptide repeat |
553 |
PF13429
|
Tetratricopeptide repeat |
554 |
PF13432
|
Tetratricopeptide repeat |
555 |
PF13431
|
Tetratricopeptide repeat |
556 |
PF13512
|
Tetratricopeptide repeat |
557 |
PF07719
|
Tetratricopeptide repeat |
558 |
PF07720
|
Tetratricopeptide repeat |
559 |
PF07721
|
Tetratricopeptide repeat |
560 |
PF12688
|
Tetratrico peptide repeat |
561 |
PF13174
|
Tetratricopeptide repeat |
562 |
PF13176
|
Tetratricopeptide repeat |
563 |
PF13181
|
Tetratricopeptide repeat |
564 |
PF13371
|
Tetratricopeptide repeat |
565 |
PF07926
|
TPR/MLP1/MLP2-like protein |
566 |
PF03151
|
Triose-phosphate Transporter family |
567 |
PF06886
|
Targeting protein for Xklp2 (TPX2) |
568 |
PF00590
|
Tetrapyrrole (Corrin/Porphyrin) Methylases |
569 |
PF11052
|
Trans-sialidase of Trypanosoma hydrophobic C-terminal |
570 |
PF02343
|
TRA-1 regulated protein R03H10.4 |
571 |
PF05513
|
TraA |
572 |
PF01963
|
TraB family |
573 |
PF07820
|
TraC-like protein |
574 |
PF09034
|
TRADD, N-terminal domain |
575 |
PF05309
|
TraE protein |
576 |
PF12696
|
TraM recognition site of TraD and TraG |
577 |
PF07916
|
TraG-like protein, N-terminal region |
578 |
PF06871
|
TraH_2 |
579 |
PF06586
|
TraK protein |
580 |
PF07178
|
TraL protein |
581 |
PF01938
|
TRAM domain |
582 |
PF08390
|
TRAM1-like protein |
583 |
PF03798
|
TLC domain |
584 |
PF06986
|
Type-1V conjugative transfer system mating pair stabilisation |
585 |
PF00923
|
Transaldolase |
586 |
PF04949
|
Transcriptional activator |
587 |
PF01709
|
Transcriptional regulator |
588 |
PF02458
|
Transferase family |
589 |
PF00405
|
Transferrin |
590 |
PF00927
|
Transglutaminase family, C-terminal ig like domain |
591 |
PF01841
|
Transglutaminase-like superfamily |
592 |
PF13369
|
Transglutaminase-like superfamily |
593 |
PF13471
|
Transglutaminase-like superfamily |
594 |
PF00868
|
Transglutaminase family |
595 |
PF00912
|
Transglycosylase |
596 |
PF06737
|
Transglycosylase-like domain |
597 |
PF04226
|
Transglycosylase associated protein |
598 |
PF02780
|
Transketolase, C-terminal domain |
599 |
PF00456
|
Transketolase, thiamine diphosphate binding domain |
600 |
PF02779
|
Transketolase, pyrimidine binding domain |
601 |
PF01997
|
Translin family |
602 |
PF01359
|
Transposase (partial DDE domain) |
603 |
PF02371
|
Transposase IS116/IS110/IS902 family |
604 |
PF02992
|
Transposase family tnp2 |
605 |
PF03017
|
TNP1/EN/SPM transposase |
606 |
PF00872
|
Transposase, Mutator family |
607 |
PF13963
|
Transposase-associated domain |
608 |
PF04236
|
Tc5 transposase C-terminal domain |
609 |
PF00486
|
Transcriptional regulatory protein, C terminal |
610 |
PF07296
|
TraP protein |
611 |
PF05404
|
Translocon-associated protein, delta subunit precursor (TRAP-delta) |
612 |
PF07074
|
Translocon-associated protein, gamma subunit (TRAP-gamma) |
613 |
PF04051
|
Transport protein particle (TRAPP) component |
614 |
PF12584
|
Trafficking protein particle complex subunit 10, TRAPPC10 |
615 |
PF08626
|
Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit |
616 |
PF03896
|
Translocon-associated protein (TRAP), alpha subunit |
617 |
PF05753
|
Translocon-associated protein beta (TRAPB) |
618 |
PF09679
|
Type-F conjugative transfer system pilin chaperone (TraQ) |
619 |
PF06834
|
TraU protein |
620 |
PF09676
|
Type IV conjugative transfer system lipoprotein (TraV) |
621 |
PF05857
|
TraX protein |
622 |
PF05509
|
TraY domain |
623 |
PF05261
|
TraM protein |
624 |
PF04956
|
TrbC/VIRB2 family |
625 |
PF09673
|
Type-F conjugative transfer system pilin assembly protein |
626 |
PF09677
|
Type-F conjugative transfer system protein (TrbI_Ftype) |
627 |
PF04610
|
TrbL/VirB6 plasmid conjugal transfer protein |
628 |
PF07424
|
TrbM |
629 |
PF13705
|
TRC8 N-terminal domain |
630 |
PF03461
|
TRCF domain |
631 |
PF03546
|
Treacher Collins syndrome protein Treacle |
632 |
PF00088
|
Trefoil (P-type) domain |
633 |
PF01204
|
Trehalase |
634 |
PF02358
|
Trehalose-phosphatase |
635 |
PF06151
|
Trehalose receptor |
636 |
PF09710
|
Treponema clustered lipoprotein (Trep_dent_lipo) |
637 |
PF08558
|
Telomere repeat binding factor (TRF) |
638 |
PF07042
|
TrfA protein |
639 |
PF05438
|
Thyrotropin-releasing hormone (TRH) |
640 |
PF06330
|
Trichodiene synthase (TRI5) |
641 |
PF08195
|
TRI9 protein |
642 |
PF03973
|
Triabin |
643 |
PF05197
|
TRIC channel |
644 |
PF13868
|
Tumour suppressor, Mitostatin |
645 |
PF05892
|
Trichovirus coat protein |
646 |
PF02080
|
TrkA-C domain |
647 |
PF02254
|
TrkA-N domain |
648 |
PF13146
|
TRL-like protein family |
649 |
PF03966
|
Trm112p-like protein |
650 |
PF12858
|
TRNA-intron endonuclease catalytic domain |
651 |
PF07973
|
Threonyl and Alanyl tRNA synthetase second additional domain |
652 |
PF03250
|
Tropomodulin |
653 |
PF00261
|
Tropomyosin |
654 |
PF12718
|
Tropomyosin like |
655 |
PF00992
|
Troponin |
656 |
PF11636
|
Troponin I residues 1-32 |
657 |
PF05731
|
TROVE domain |
658 |
PF06011
|
Transient receptor potential (TRP) ion channel |
659 |
PF02081
|
Tryptophan RNA-binding attenuator protein |
660 |
PF08344
|
Transient receptor ion channel II |
661 |
PF03301
|
Tryptophan 2,3-dioxygenase |
662 |
PF11991
|
Tryptophan dimethylallyltransferase |
663 |
PF04820
|
Tryptophan halogenase |
664 |
PF08055
|
Tryptophan leader peptide |
665 |
PF08056
|
Tryptophan operon leader peptide |
666 |
PF09534
|
Tryptophan-associated transmembrane protein (Trp_oprn_chp) |
667 |
PF01371
|
Trp repressor protein |
668 |
PF00290
|
Tryptophan synthase alpha chain |
669 |
PF03222
|
Tryptophan/tyrosine permease family |
670 |
PF12735
|
TRAPP trafficking subunit Trs65 |
671 |
PF01509
|
TruB family pseudouridylate synthase (N terminal domain) |
672 |
PF10412
|
Type IV secretion-system coupling protein DNA-binding domain |
673 |
PF08751
|
TrwC relaxase |
674 |
PF00913
|
Trypanosome variant surface glycoprotein (A-type) |
675 |
PF10659
|
Trypanosome variant surface glycoprotein C-terminal domain |
676 |
PF00089
|
Trypsin |
677 |
PF13365
|
Trypsin-like peptidase domain |
678 |
PF08248
|
Tryptophyllin-3 skin active peptide |
679 |
PF12319
|
Tryptophan-Threonine-rich plasmodium antigen C terminal |
680 |
PF03249
|
Type specific antigen |
681 |
PF01166
|
TSC-22/dip/bun family |
682 |
PF12637
|
TSCPD domain |
683 |
PF04668
|
Twisted gastrulation (Tsg) protein conserved region |
684 |
PF07771
|
Tick salivary peptide group 1 |
685 |
PF04705
|
Thiostrepton-resistance methylase, N terminus |
686 |
PF06300
|
Tsp45I type II restriction enzyme |
687 |
PF11493
|
Thylakoid soluble phosphoprotein TSP9 |
688 |
PF03073
|
TspO/MBR family |
689 |
PF00090
|
Thrombospondin type 1 domain |
690 |
PF02412
|
Thrombospondin type 3 repeat |
691 |
PF05735
|
Thrombospondin C-terminal region |
692 |
PF03133
|
Tubulin-tyrosine ligase family |
693 |
PF12468
|
Type III secretion system leucine rich repeat protein |
694 |
PF02956
|
TT viral orf 1 |
695 |
PF02957
|
TT viral ORF2 |
696 |
PF01167
|
Tub family |
697 |
PF12198
|
Theoretical tuberculin protein |
698 |
PF03542
|
Tuberin |
699 |
PF00091
|
Tubulin/FtsZ family, GTPase domain |
700 |
PF00418
|
Tau and MAP protein, tubulin-binding repeat |
701 |
PF13809
|
Tubulin like |
702 |
PF03953
|
Tubulin C-terminal domain |
703 |
PF04525
|
Tubby C 2 |
704 |
PF00567
|
Tudor domain |
705 |
PF08581
|
Tup N-terminal |
706 |
PF04906
|
Tweety |
707 |
PF01021
|
TYA transposon protein |
708 |
PF09059
|
TyeA |
709 |
PF03251
|
Tymovirus 45/70Kd protein |
710 |
PF00983
|
Tymovirus coat protein |
711 |
PF12564
|
Type III restriction/modification enzyme methylation subunit |
712 |
PF09474
|
Type III secretion system YscX (type_III_YscX) |
713 |
PF06087
|
Tyrosyl-DNA phosphodiesterase |
714 |
PF12261
|
Thermostable hemolysin |
715 |
PF00577
|
Type VII secretion system (T7SS), usher protein |
716 |
PF04001
|
Transcription factor Vhr1 |
717 |
PF05101
|
Type IV secretory pathway, VirB3-like protein |
718 |
PF07328
|
T-DNA border endonuclease VirD1 |
719 |
PF13206
|
Trypanosomal VSG domain |
720 |
PF02467
|
Transcription factor WhiB |
721 |
PF07483
|
Tryptophan-rich Synechocystis species C-terminal domain |
722 |
PF00739
|
Trans-activation protein X |
723 |
PF01797
|
Transposase IS200 like |
724 |
PF13957
|
Toxin YafO, type II toxin-antitoxin system |
725 |
PF07321
|
Type III secretion protein YscO |
726 |
PF09619
|
Type III secretion system lipoprotein chaperone (YscW) |
727 |
PF03162
|
Tyrosine phosphatase family |
728 |
PF13350
|
Tyrosine phosphatase family |
729 |
PF13348
|
Tyrosine phosphatase family C-terminal region |
730 |
PF01396
|
Topoisomerase DNA binding C4 zinc finger |
731 |
PF02135
|
TAZ zinc finger |
732 |
PF13453
|
Transcription factor zinc-finger |
733 |
PF02953
|
Tim10/DDP family zinc finger |
734 |
PF02176
|
TRAF-type zinc finger |
735 |
PF12760
|
Transposase zinc-ribbon domain |
736 |
PF14319
|
Transposase zinc-binding domain |