3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13329 Details: PFam ID : PF13329 PFam Domain Description : Autophagy-related protein 2 CAD motif Number of Sequence in 50% Dataset : 28 Number of Sequence in Full Dataset : 66 Average sequence length: 145.5 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13329B6K582_SCHJY_830_97992.5 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13329E7RAG0_PICAD_815_986100 Sequence based PCA Plot of the family - PF13329 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 3 motifsMotif1 Start=24 Length=8Motif2 Start=6 Length=17Motif3 Start=136 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF13329
PFam Domain Description : Autophagy-related protein 2 CAD motif
Number of Sequence in 50% Dataset : 28
Number of Sequence in Full Dataset : 66
Average sequence length: 145.5
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER