3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00191

Details:

PFam ID : PF00191

PFam Domain Description : Annexin

Number of Sequence in 50% Dataset : 114

Number of Sequence in Full Dataset : 2006

Average sequence length: 64.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00191	C9SAW8_VERA1_219_288	58.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00191	E3MY10_CAERE_185_252	100

Sequence based PCA Plot of the family - PF00191 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=40 Length=11
Motif2 Start=14 Length=11
Motif3 Start=2 Length=11
Motif4 Start=52 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay