3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07651

Details:

PFam ID : PF07651

PFam Domain Description : ANTH domain

Number of Sequence in 50% Dataset : 92

Number of Sequence in Full Dataset : 357

Average sequence length: 236.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07651	E9AX18_LEIME_451_481	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07651	A2DSS5_TRIVA_318_494	99.7

Sequence based PCA Plot of the family - PF07651 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=1 Length=8
Motif2 Start=225 Length=8
Motif3 Start=88 Length=8
Motif4 Start=256 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay