3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03861 Details: PFam ID : PF03861 PFam Domain Description : ANTAR domain Number of Sequence in 50% Dataset : 58 Number of Sequence in Full Dataset : 929 Average sequence length: 55.8 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF03861E0ULV0_CYAP2_31_49No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF03861B5J427_9RHOB_128_19399.8 Sequence based PCA Plot of the family - PF03861 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=10 Length=8Motif2 Start=1 Length=8Motif3 Start=41 Length=8Motif4 Start=26 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF03861
PFam Domain Description : ANTAR domain
Number of Sequence in 50% Dataset : 58
Number of Sequence in Full Dataset : 929
Average sequence length: 55.8
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER