3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03747

Details:

PFam ID : PF03747

PFam Domain Description : ADP-ribosylglycohydrolase

Number of Sequence in 50% Dataset : 433

Number of Sequence in Full Dataset : 1311

Average sequence length: 267.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03747	D8G7B8_9CYAN_11_338	93.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03747	D9XP75_9ACTO_6_155	100

Sequence based PCA Plot of the family - PF03747 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=2 Length=23
Motif2 Start=452 Length=8
Motif3 Start=236 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay