3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00706

Details:

PFam ID : PF00706

PFam Domain Description : Anenome neurotoxin

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 32

Average sequence length: 41.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00706	Q6Y858_SKECO_1_71	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00706	B1NWT3_9CNID_37_70	100

Sequence based PCA Plot of the family - PF00706 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=8
Motif2 Start=19 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay