3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14156

Details:

PFam ID : PF14156

PFam Domain Description : Antirepressor AbbA

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 14

Average sequence length: 57.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14156	C5C997_MICLC_27_145	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14156	E5W3B4_9BACI_1_58	100

Sequence based PCA Plot of the family - PF14156 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay