3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06847

Details:

PFam ID : PF06847

PFam Domain Description : Archaeal Peptidase A24 C-terminus Type II

Number of Sequence in 50% Dataset : 23

Number of Sequence in Full Dataset : 63

Average sequence length: 89.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06847	D4GY85_HALVD_274_340	18.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06847	E1RIA4_METP4_212_320	100

Sequence based PCA Plot of the family - PF06847 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay