3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF00211

Details:

PFam ID : PF00211

PFam Domain Description : Adenylate and Guanylate cyclase catalytic domain

Number of Sequence in 50% Dataset : 809

Number of Sequence in Full Dataset : 3745

Average sequence length: 174.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00211	C5LKD5_9ALVE_244_359	88.9

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF00211	B7QMS5_IXOSC_125_209	99.8

Sequence based PCA Plot of the family - PF00211 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=44 Length=8
Motif2 Start=21 Length=8
Motif3 Start=69 Length=8
Motif4 Start=2 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay