3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF10591

Details:

PFam ID : PF10591

PFam Domain Description : Secreted protein acidic and rich in cysteine Ca binding region

Number of Sequence in 50% Dataset : 48

Number of Sequence in Full Dataset : 158

Average sequence length: 104.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10591	E1GSJ2_LOALO_1_52	91.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF10591	A1YIY4_PETMA_153_288	100

Sequence based PCA Plot of the family - PF10591 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=1 Length=8
Motif2 Start=128 Length=8
Motif3 Start=13 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay