3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12162

Details:

PFam ID : PF12162

PFam Domain Description : STAT1 TAZ2 binding domain

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 15

Average sequence length: 21.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12162	C2CPV0_CORST_6_85	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12162	O93598_DANRE_712_734	85

Sequence based PCA Plot of the family - PF12162 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay