3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF07422

Details:

PFam ID : PF07422

PFam Domain Description : Sexual stage antigen s48/45 domain

Number of Sequence in 50% Dataset : 72

Number of Sequence in Full Dataset : 173

Average sequence length: 119.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07422	B3L0R3_PLAKH_1762_1924	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF07422	Q7RGY9_PLAYO_302_423	100

Sequence based PCA Plot of the family - PF07422 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay