3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF06131

Details:

PFam ID : PF06131

PFam Domain Description : Schizosaccharomyces pombe repeat of unknown function (DUF963)

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 24

Average sequence length: 33.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06131	E8LBK6_9FIRM_1_65	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF06131	Y3119_METAC_41_67	91.3

Sequence based PCA Plot of the family - PF06131 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay