3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09119

Details:

PFam ID : PF09119

PFam Domain Description : SicP binding

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 9

Average sequence length: 72.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09119	A9SSL1_PHYPA_290_434	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09119	BOPA_BURTA_31_114	100

Sequence based PCA Plot of the family - PF09119 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay