3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF03567

Details:

PFam ID : PF03567

PFam Domain Description : Sulfotransferase family

Number of Sequence in 50% Dataset : 493

Number of Sequence in Full Dataset : 941

Average sequence length: 212.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03567	A3W4A4_9RHOB_277_433	93.2

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF03567	C7QLJ7_CYAP0_15_216	99.5

Sequence based PCA Plot of the family - PF03567 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=1 Length=8
Motif2 Start=236 Length=8
Motif3 Start=12 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay