3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF09575

Details:

PFam ID : PF09575

PFam Domain Description : Small spore protein J (Spore_SspJ)

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 5

Average sequence length: 36.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09575	D6AXA0_9ACTO_1_196	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF09575	Q65F13_BACLD_1_46	100

Sequence based PCA Plot of the family - PF09575 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay