3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF02208

Details:

PFam ID : PF02208

PFam Domain Description : Sorbin homologous domain

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 21

Average sequence length: 39

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02208	C9J3W4_HUMAN_67_89	66.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF02208	E7F8Y3_DANRE_118_162	100

Sequence based PCA Plot of the family - PF02208 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=4 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay