3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF08183

Details:

PFam ID : PF08183

PFam Domain Description : Stage V sporulation protein family

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 15

Average sequence length: 24.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08183	E4PSZ9_MYCLG_454_510	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF08183	Q9K9Z3_BACHD_1_26	78

Sequence based PCA Plot of the family - PF08183 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay